| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4591 |
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| Symbol | |
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| ID | 5756425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009998 |
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| Strand | - |
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| Start bp | 67266 |
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| End bp | 73226 |
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| Gene Length | 5961 bp |
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| Protein Length | 1986 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290949 |
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| Product | conjugative transfer relaxase protein TraI |
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| Protein accession | YP_001557007 |
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| Protein GI | 160873000 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family
[TIGR02760] conjugative transfer relaxase protein TraI
[TIGR03174] CRISPR-associated protein Csc3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.836035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTCCA TCAGTCCCAT TGCGTCGAGC GCTGGCGGCG CGGCCAGCTA CTACCTCAGT
GAAGAAAAGA ACCTCAATTT GCCTGACGTG TCGTTAGAAA AAGCAGCGGA CGCCAAAGAA
GGGGAAACCA ACTATTACTT GAAAGAGCAG AGCGCCGAGC CCAATACCCA ATGGTTTGGC
AAACTGGCAG AGCAAGAGGG AATGCTAGGT AAGCCCGTTG AAGAACATCA ACTCAAAGAG
GTGTTAGCCG GTAGCCTGAA CGACCAAACG CTTAAAACCC AAAACAGCAA CGCCCGCAAC
GGTTTTGACT TTACCTTTTC GGCGCCTAAA TCCGTCAGTT TGCTTGCACT CGTGGGCGGC
GATAAGCGCT TAATGACAGC GCACGATGAC GCGGTAAAAT TCGCGTTATC GCATATCGAG
AAAGATGCGG CGCAGGCCAG ACAAACTAAC CCTGATACCA AAGCGACCTC TTTTGAAAAC
ACGGGCAATT TGCTGTTTGC AATGGTGCGT CACAAAACCA GCCGTGAAGA AGATCCGCAG
CTGCACACCC ACTCACTCAC CGCCAACATG ACCAAGGACA GCGAGGGCAC ATTGCGCGCG
CTGGCAAGCA GCTTTAAACA AAAAGGCGGC ATCATCAATG GCACGGGTGA GCGGGTTTAT
AACCATCAAA AATACTATAC CTCGCTCTAT CAAAGCGCCT TAGCCCGCAG TGTTGAACAA
GCGGGTTATC AAACTCGTTC ACTGGGTAAT AATTTGTTTG AAGTCGAAGG TGTCCCGCAG
TCCTTGCTCG ATACCTTTTC AACCCGTAGC CAGCAAATCA ACGAACAAAC CCAAAGCTTA
GGTTTAGACT CCCAAGCGGC GCGGGATGTG GCCGCAAAGG ACACCCGCAA GAGTAAAGCC
TATACCAGCG AAGCCACCTT GTTTGAGCAA TGGAAAAACA AAGCCAATAA CAGCGGCTTT
AACCTGACAA GCTTCGTGAC GGACAGCATG TCACGAGAAA CATCACTCAA TGCGTTAGCG
CTCAAACCCG CCGCTATCGA TGCGGTGAGT CGTGCGATTG AGCACGCCAG TAACACCCAA
AACCGTTTTA ATTACGCGAA ATTAGTGGAA TCAGCCACGC TTGAATTTAC GCGCGGCCAG
AAGCTCGATG CGCTCGATAT TAAATTGGCA CTCGATAAGC ACATTGAAGA TGGCGCACTT
ATTCCGCTTG ATAAAGAGTC TGCGACCTTT ACCAGCGCCG CCCACATCAA AGCCGAAACT
AACCTGCTAG AGAGCATCAA GCCAAAAACG GCCAACATGC GCCAAGTGGT CGATACCAAC
ACGCTTCAAG GCAAAGGCTT AAATGCGGAC AACCAAAAGA AAGTCTCTGA ACTGTTCGCC
AGTACCAAAC AAGTTAACCT AGTGAACGTC TTTGGTAGCA GTGAACAGCT CGCGACCGCC
CTGCTCAATG TCGGTGAGGC CAACGGTAAA CGTATTCACA TCATTACCCC TGACATGAAA
AGCAAACTGC AAACCAGTGA ACGAGTGCAA CGCGATTCAT CGACTGTGGT GAAGTGGATA
ATGAACCACT TCAAACCCGA CCACACCCAT ACACTCAGCA GCTTTACTAA AACGGCCAAC
AACACTAACC GCGATATTTT AGTGGTTGAG AACGCCAATA AACTCGGCCT TAACGACTTT
AATGCCCTGC TCGCGCAAGC CAAAGCGGGT AACAGTAAAG TGATTTTGCT CAATCACGCC
AATGCCAAGC AAGGCATGAA AGCCGGTAAC GCTATCGAGG TACTTAAAAA AGGCAACGTA
AACGAAAGCA ACTGGGTCGC CACAAAACAA AGCAACACAG CCATGCGACT GCATGAAAGC
AAAGACAGTG ACAGGGTTAA CCTGATTGCA AAAACTTACG CGCAACTGCC CGAGAAGCAA
CACACCCAAG TCATTGCGGG CACCCATAAA GATGTGAAGC AGCTTAACAG CGCCATTCGC
GCAGAACTGC AAAATCAAGG TGATGTATCG CGCCTTGGGC TCAACATCCC TACCCTTAAT
CCCGTGTTCT TATCCGCGCA GCAACGGGAA GTCGTCGGCC AGTACACCAA GGGCATGGTA
CTCACCCAAT GGCAAAAAGT CGGTGGCCGC AATCAACAGC AGCAATTGAC GGTGGACAGT
GTAAACCGTG ATAACAACAC CCTCACGCTG ATAGACAAAA ACGGTAAAGC ATCTGAGATT
AACCCCAGCA GCAAAGCCTT TAAAGCCGCA GAGTACGTGA TCGCTAAACC GGACAATTTA
CATATCGCCA ACGGCGATAA ACTCATCATG GCCACAAACC ATCAAGACAG TGGTTTGAGC
AAACAAATTT ATACGATCAA CGCCCTGTCC AAAGAATGGG TCACGCTCAA AGACGAAAGC
GGCAAACAGC ACAGCGTTAA AGCCAGTGCA TTGCACCATG CGCCGCTCAA TCATGGTTAC
GCCACCACGC CAAGCAATGC CAGCCCTAAT GCAAGTCACC ACATCGTCAA CATTAAAGCC
TATAGCGCCT CAAAAGAGTG GTTACATGAC ACCCTGACAC AAGGCATCAA ACACATCGAT
ATATTCACCG ACAAGGCACA ACAATTTGAT GACCGATTAG AAAAAAGTGA GGTGAAACCA
TCCAGTATTT CGCGCATCAT GCAAGCCGCT GACATGCCAG AAAAGTTCGT GAATAGCCAA
ACCACGGCCC TGCTCACCCA AGATGTGACC GCAGCACTGA ATGCCATTGG TGCCCAGCAT
CAAGACAAAG GGCTTATTCA CAATGCCGTG GACTTTGCCA TCCAGCACAT TAGCGAGAAA
GAAGCCGGTT ACTCACAAAA AGAGCTGATT GTTAATGCGA TCAAGTACGC ATTTGAGGAA
AAAGGCACCA GCATTACCCA ACATGAAATC ATCAACACCC TGCAACACAT GGCCACGAAC
AGCACGGATA AAGGCGCGCC CTCACTCCTG AGCGCCGAAT ACCACGACGG CACCCGCTGG
ACAACCCAAG CCGCTATCGA TACCGAAGTG CGTATTTTAG ACAGACTGCA AGCGGGCAAA
GACCAACTTG CGCCCCTTAC CAGCGTTGAA CACGCCACGC AGGTACTCAG TCAAAATCAA
AGCCTGACCG ATGGCCAAAA AGACGCGACC TTGCTTATCA CCACCACCAA AGACCGATTT
GTAGGTGTTC AAGGGTTAGC GGGTACGGGT AAATCGACCA TGCTTGAAAC GGGTATCGAT
CTTGTTAAAC AAAGCGAATC CATTCTCAAC ACACAACCCG ATAAGACACC GACACAATTC
ATAGGTCTAG CGCCGACACA CGCCGCCGTT AACGAACTCA AAGACAAGAA CGTCGAAAGC
CAAACGGTGC AATCACTCCT AAGCAACTTT TTAAGCCAAG ATGCGAAACC GGACCAATAC
GCCAACACCG TGTTCTTGCT CGATGAATCC TCGATGACCA GTAACGCCCA AATGGATAAA
TTTACCCATT TGATTGAGAC AACAGGCGCG CGCGCCGTGT TCTTGGGTGA CACTAAACAG
CTAACGTCCC AAGAAGCGGG AAAACCTTTT GAACTCGCGT TAAACAAAGG CGCAATCAAT
AGCGTCACCA TGAAAGACAT TGTGCGCCAA CAGAACAGCA CGCTACTGAG TGCAGTACAC
AATATTGTCG ATCGCCAAGG CGAAAGCGCT ATTGATAAAA TTCAGCAACA ATTACCCTTT
GACCAATACA CCGCGCCCAC TGCGAACGAC GCGGTAACGC CCGAAAAGCA GGCTACCGCT
AACATCAATC AAAGCTTGAA TATCATTTCA ACTTTGCAGT TGATAACCGA TAACCCGAAG
AAAAACCAGC AACTGGCGAC CGAAGCCCTG CCCGCCACGG TGGCACTGGA ATACTTGGCC
AGAACACCTA AAGCGCGTGA AAATACCCTT ATCATTGCGT ACACCAACAA GGAACGCGAC
GACATTACCC ACGAAATCCG CCAAGGGTTA CAGCAACAAA AAAGCCTCAG TACCGAGCAA
TTCACTGTAC CGAGATTACG TGGAGTCCAT GCCAGCAAGG CCGAACTGGC GACCATGTTG
CCCTATCAGC AGGGGTTAAT CCTGACGACC GGTAAAGACA GTTATTTTGA AATTATGAAG
GTCGATAAGC TCAATAACAT GCTCACCCTC GCGGATATGA AAACCGGCGA GGAAAAGCAT
TTCTTCCCCA AAAATCATGG CCACAAATTC ACGAACCTTT GGGCTAAGAG TGAGCAACCT
CTCGCAGAAG GCGACAGTAT CATGCTCCGC AAAAGCGATA TTGACCGTGA AATGCAGGGC
AACAAAACCT ATACCGTTAG CAGCATTGAC GATAAACAAA TGCAGCTCAA ATCCACGGAT
AACCACACAT TAACGCTCTC AACCAAAGAT TTGAAAGATG CTCATTGGGA TTACGCATAC
ACCCGCACCG CCGATATGGC GCAAGGGGCA ACCTATGAGA ATGTCATTAC CGCGATTAAG
GGCCAAGGTG CATTAACTAA CGTAAGGCGC GCGTATATCG ATATCACCCG TGCCAGTAAG
CACGTAAAAA TCATCACCGA TAACCCGCAA AAAATGATGC TCTCATGGGT CAATAACGAT
CCCAATAAAG TCTCTGCACT TGAGACAAGA GATAAGTATT ACCCTGAACA TACCCCGCTA
TTTAATGACA AACCCTTGCC GCAGGAAAAC CCAAAGTACC TCGATGTAAA TGGATATGTG
GATCTAAAAC TGATGGCCAC CGAGCTAAAT GCCAAGCTTC CGGCCTACAG TGAATCACTG
GCAACGCAGC TTTTAGGTGA GCCGAACCAC GATAAATCAG ACAAAGATAA CCTGACATTT
GGCAAAGAGG GGAGCCTAAC ATTGACCACA ACGGGCCAAT ATCGTGGCTA TTTTAAAGAC
TGGAAAACCG GCGATAAAGG CACCTTAATT AACCTGATTA TGGTCGCTGA AAAATGCAGT
TATAAAGATG CACTTTATAA AGCCGATAAA ATGATGAACG AACCCGATAA ATATAATCTG
GTAAAAAACC CACAGCATGA TGAATTAACA CATGCCATTC CGGTTAAGCA AAGCCAATTA
GAAGCGCGCG CGAAGCAATA CTTTAACGAA GCTAAACCTA TAGAAAACTC ACTCGCACAA
ACCTATTTAG CCAAGCAAGG AATCGAGGTT ACGAAGCATG AAAACTTACG GTTTCACGAT
GCCGTTTATT CGTCAGAAAA ACGTGGGACC TTCCCCGCAT TAATTGCGAA CATCACCAAT
GATAAGGATG AGACCAAGGC AGTAGAAATT ACTTACCTTG ATAAATCCAG CGGTGACATT
GCAGCGCTTA AAATAAACAA GCGCATACTC GGCTCTAAAT CGGGGAACAG CACGACGATC
AACAAAGGCA ATAATTCAGA CTATAGCATT GTCGCTGTCG GGGTAGAGAA TGCACTTAAG
ATAAATGCTG ACAATAAAAA CGGAGCTGAC GTTATTGCGC TAAACAATAA TAATGACACT
AAAACATTCA ATACAAATGA ATTGCGCGAA AACGTGATAA TGGTACTTGA TACTAATAAT
TCACAAGACA CTGCAAAACT GGCTAATGAC CTTACCGAAA AATTCAGCAA GGAAAATATA
CATGCGGTAA TTATTGAACC CAGCCTGATA CCTGACGGCT TAAACAAAGT CGAAACGACA
AAGCAATTAG TCAACGAAGC GGTCTATAGC ATAACGACAA AAGACAATAC ACTATCTAAA
GCCATTCAAT CATTGAGTCA TGATATTGCA GGCACAAAAA ATATCACGAT GAATGATGAC
AGCACTAACG TAGCAACGAA TAAAATAAAG CACGATGAAC ACTATCAACA TTTAGCAATG
GATAGCCACC GTTCACCCAC GAAAGAACAT AGCCCCAACA TCGACAATCC TAAATTGGAT
ATTGGGGAAA AGACCATGTA A
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| Protein sequence | MLSISPIASS AGGAASYYLS EEKNLNLPDV SLEKAADAKE GETNYYLKEQ SAEPNTQWFG
KLAEQEGMLG KPVEEHQLKE VLAGSLNDQT LKTQNSNARN GFDFTFSAPK SVSLLALVGG
DKRLMTAHDD AVKFALSHIE KDAAQARQTN PDTKATSFEN TGNLLFAMVR HKTSREEDPQ
LHTHSLTANM TKDSEGTLRA LASSFKQKGG IINGTGERVY NHQKYYTSLY QSALARSVEQ
AGYQTRSLGN NLFEVEGVPQ SLLDTFSTRS QQINEQTQSL GLDSQAARDV AAKDTRKSKA
YTSEATLFEQ WKNKANNSGF NLTSFVTDSM SRETSLNALA LKPAAIDAVS RAIEHASNTQ
NRFNYAKLVE SATLEFTRGQ KLDALDIKLA LDKHIEDGAL IPLDKESATF TSAAHIKAET
NLLESIKPKT ANMRQVVDTN TLQGKGLNAD NQKKVSELFA STKQVNLVNV FGSSEQLATA
LLNVGEANGK RIHIITPDMK SKLQTSERVQ RDSSTVVKWI MNHFKPDHTH TLSSFTKTAN
NTNRDILVVE NANKLGLNDF NALLAQAKAG NSKVILLNHA NAKQGMKAGN AIEVLKKGNV
NESNWVATKQ SNTAMRLHES KDSDRVNLIA KTYAQLPEKQ HTQVIAGTHK DVKQLNSAIR
AELQNQGDVS RLGLNIPTLN PVFLSAQQRE VVGQYTKGMV LTQWQKVGGR NQQQQLTVDS
VNRDNNTLTL IDKNGKASEI NPSSKAFKAA EYVIAKPDNL HIANGDKLIM ATNHQDSGLS
KQIYTINALS KEWVTLKDES GKQHSVKASA LHHAPLNHGY ATTPSNASPN ASHHIVNIKA
YSASKEWLHD TLTQGIKHID IFTDKAQQFD DRLEKSEVKP SSISRIMQAA DMPEKFVNSQ
TTALLTQDVT AALNAIGAQH QDKGLIHNAV DFAIQHISEK EAGYSQKELI VNAIKYAFEE
KGTSITQHEI INTLQHMATN STDKGAPSLL SAEYHDGTRW TTQAAIDTEV RILDRLQAGK
DQLAPLTSVE HATQVLSQNQ SLTDGQKDAT LLITTTKDRF VGVQGLAGTG KSTMLETGID
LVKQSESILN TQPDKTPTQF IGLAPTHAAV NELKDKNVES QTVQSLLSNF LSQDAKPDQY
ANTVFLLDES SMTSNAQMDK FTHLIETTGA RAVFLGDTKQ LTSQEAGKPF ELALNKGAIN
SVTMKDIVRQ QNSTLLSAVH NIVDRQGESA IDKIQQQLPF DQYTAPTAND AVTPEKQATA
NINQSLNIIS TLQLITDNPK KNQQLATEAL PATVALEYLA RTPKARENTL IIAYTNKERD
DITHEIRQGL QQQKSLSTEQ FTVPRLRGVH ASKAELATML PYQQGLILTT GKDSYFEIMK
VDKLNNMLTL ADMKTGEEKH FFPKNHGHKF TNLWAKSEQP LAEGDSIMLR KSDIDREMQG
NKTYTVSSID DKQMQLKSTD NHTLTLSTKD LKDAHWDYAY TRTADMAQGA TYENVITAIK
GQGALTNVRR AYIDITRASK HVKIITDNPQ KMMLSWVNND PNKVSALETR DKYYPEHTPL
FNDKPLPQEN PKYLDVNGYV DLKLMATELN AKLPAYSESL ATQLLGEPNH DKSDKDNLTF
GKEGSLTLTT TGQYRGYFKD WKTGDKGTLI NLIMVAEKCS YKDALYKADK MMNEPDKYNL
VKNPQHDELT HAIPVKQSQL EARAKQYFNE AKPIENSLAQ TYLAKQGIEV TKHENLRFHD
AVYSSEKRGT FPALIANITN DKDETKAVEI TYLDKSSGDI AALKINKRIL GSKSGNSTTI
NKGNNSDYSI VAVGVENALK INADNKNGAD VIALNNNNDT KTFNTNELRE NVIMVLDTNN
SQDTAKLAND LTEKFSKENI HAVIIEPSLI PDGLNKVETT KQLVNEAVYS ITTKDNTLSK
AIQSLSHDIA GTKNITMNDD STNVATNKIK HDEHYQHLAM DSHRSPTKEH SPNIDNPKLD
IGEKTM
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