Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4557 |
Symbol | |
ID | 5756392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009998 |
Strand | + |
Start bp | 36394 |
End bp | 37335 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641290916 |
Product | integrase catalytic region |
Protein accession | YP_001556974 |
Protein GI | 160872967 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.839821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATC AACAGTTGAC CGAAGCAAGA CGATACCAGA TTTCCGTGCT GTTAGAACAG GGCTTTTCTA TAGCACACAT AGCTAAATGC ATTGATTGTC ATCGCTCTAG TGTCTATAGG GAAGTTAAAC GATGCCAAGG GCAATCACGC TATCAGCCTG ATATTGCACA CAAGCAGGCT GTCACAATGA GGCGTCAGTC GAGTAAATAT GCGATACCCT CACAGCGAAT AGAGAGCATC GTCCTTTTGC TGCAATTGGA TTGGAGCCCT GAGCAAATCT CGCAGGTGTT GCGTCTGGTG AAGGAGCCCG TCAGTCACGA GTGGATTTAT CGCTATATTG CACGCGATAA ACGCCGTGGT GGCAAACTTT ATCGTCATTT ACGTCAAGGA CATAAGCGTT ATCGACGCGG TAAAGTAGAG CAAGCTCCTA CCATAAAAAA CGCCGTATCC ATTGACGACA GACCAGCCAT TGTTGATAGC CGAGAGCGAT TTGGCGACTG GGAAATTGAC ACCGTATTGG GGCTGCATGG AACGGGTTCG ATTGTAACCC TATTAGAGCG TAAGACTCGG TTTTATTTGA TAAAGAAAGT CAATTCGAAG TCAGCGGCAG ATGTAACGAA AGCGACGATT GAGTTACTGA TGCCATATAG GGCGCATGTG CTGACGATAA CGGCAGATAA TGGACGCGAA TTTGCTCACC ACCAAGAGAT AGCAGAGGCG CTAGATACGC AGGTGTATTT TGCGCACCCT TATCGTTCTT GTGAACGTGG TGCGAATGAA AACGCCAATG GATTACTGCG GCAGTACGTC AAAAAAGGGG TTGATTTGAG GCTAGTGAGT GATGAATTAA TCGAATTTGC TCAGAATAGA ATTAACTATC GTCCCAAAAA GTGTTTGAAG TTTAAGCAGC CTGCGGTGGT GTTTCACCAG TTAGCTGCTT AA
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Protein sequence | MNYQQLTEAR RYQISVLLEQ GFSIAHIAKC IDCHRSSVYR EVKRCQGQSR YQPDIAHKQA VTMRRQSSKY AIPSQRIESI VLLLQLDWSP EQISQVLRLV KEPVSHEWIY RYIARDKRRG GKLYRHLRQG HKRYRRGKVE QAPTIKNAVS IDDRPAIVDS RERFGDWEID TVLGLHGTGS IVTLLERKTR FYLIKKVNSK SAADVTKATI ELLMPYRAHV LTITADNGRE FAHHQEIAEA LDTQVYFAHP YRSCERGANE NANGLLRQYV KKGVDLRLVS DELIEFAQNR INYRPKKCLK FKQPAVVFHQ LAA
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