Gene Sbal195_4556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4556 
Symbol 
ID5756391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009998 
Strand
Start bp32985 
End bp36071 
Gene Length3087 bp 
Protein Length1028 aa 
Translation table11 
GC content42% 
IMG OID641290915 
Producttransposase Tn3 family protein 
Protein accessionYP_001556973 
Protein GI160872966 
COG category[L] Replication, recombination and repair 
COG ID[COG4644] Transposase and inactivated derivatives, TnpA family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.875652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG ACGTTCGGCG GCTATCTATT TTGTCAACTG ATGAAATAGA TGAACTGTTT 
GGATTACCTC ATTTCTCAGA TGATGATCGT CGATTATATT TTGACTTAAG TGCTAAAGAG
CGCGAGCTAT TCGACAATAC CCGAACGTTT TCTGTGGCAG CCCATTTAGT ATTGCAACTG
GGCTATTTCA AAGCCAAACG GCAGTTTTTC AGTTATGAAC AAGAATCGTC AGTACTAAAT
GACTTGGATT ACATTGCCGC GCTGTACTTT CCCACCAAAA CGCTTTCAAG GCTGAAAAGT
CCCTCAAGAC CGATTAGGGC TGAACAACAA CGAGCAATTC TTGATTTATT CCAGTATAAA
CAATGTGATA ATGAGGTAAA AGTTGATTTG GAAGATAAAG CACAGCGGGT TGCGATGCTA
TCGACACAAC CTATCTTTAT CTTTCGTGAA TTAACCCAAT ACTTAGCATT ACACCGTATT
GTCATGCCCA GTTATCGGTA TATGCAAGAG ATGATTGGTA GAGTGGTGGC TTATGAACGC
ACCCGTATTG CTCGATTACT TAGCACTTGC ATGACTTCAC TTATCGATCA GCAATTAGCG
GCTTTGCTTC GGGCTGAGTC AGGAGTATTT CGCGTCAGCG CATTAAAACA TGAAGCTAAA
GATTTCAGTT ATAAAGAATT GCGACATGAA GTCGCACGGC GGCAGTTTTT CCAGCCTCTA
CATGAGTTTG CCAAGCAGTT CCTCATAACA GCGGGGATCT CCAATGAAAG CGGCAAGTAT
TATGCTTCTA TGGTTAAGTT TTATACCACT TATAAACTTC AACGCATGAA AAAAGAGACT
GCTCAGTTAT ATCTGCTGTT TTTTGCTTTT CATCGGTTTC AGCAAATTAA TGACAACTTA
ATTGAAGCAT TGCTCCATTG GGTCGATCAA TACGAGAAAC AGGCCAAGCG TGCCGCTGAA
GAAGCAATGA ATAATGCGGT TACCAATGCA GCGAAAAATT TACAGGCTGC GGGTCATGTA
TTGAGCCTGT TTACGGATGA CACCATCACC GATGACACAC CTTTTTCCAT TATTAAAGAA
AAAGCCTATG CATTGCTTGA ACAAAAGAGA TTCCCATTAG TTGCTGATTA CTTACGCAAT
ATTGCTTTCG ACAAAACGGC ATTTGAATGG TTACATTACA CAAAATTATC CGCCACATTC
AAACGTAACT TAAGGCAACT TTTTACTGAT CTGGATTTTG CCGGACGTGT AGAAGACTCT
CCTTTGCTTG AAGCTATCGG TTTTTTACAA AACTTGTTAC GCACAGAAAA ATCACCAAGG
CAAACTGATC CTAATGCATT TCCGACTGAG ATTATTCCTA AAGGTTTACG CCGATATTTG
TTTAGTAAAG AGGGTAAAAC ATTTAAAACG CTAGATGTAG ATCGCTATGA GTTTTTGGTC
TATCGCCTAC TACGCAACTC ACTGGAAGCG GGTGATGTGT ACGTTAAACA TAGTAATGAA
TTTCGCCGCT TTGAAGATGA CTTAATAAGC GATCTTAGAT GGCAGGATAA AGAACGAGTA
TTGCAAGATA TTGGTGCACC CATTTTATTG GCCCCTATCC AAGATACTCT GGCTGTATTT
CATACTATGC TAGCAGCACG TTATAGTGCG ATTAACCAAC ATATTTCTGA TGGGGTCAAC
AAACATATTA AAGTAATTGG GGCTGCCGAA AAGCGTCGTT GGAAGCTGCT TTATCCGAGC
AGTGATGAAT CCGTTAATAG CGATTTTTAC AGCCAGTTAC CAGGAATTGG TATTGCGGAT
CTACTGTGGT TTGTTGCGGG TAATACTGGA TTTTTAAATG CATTTACCCA TGTATTAGAT
CGTTATGTAA AGCATGAAGC TGATCCCCGT GAAATTTTCG CCTGTATTGT TGCGATGGGA
ACAAACATGG GGTTAGCAAA AATGGCTGAG GTTTCAGGCC TTAGCTCAGC ATCAATGGCG
GGGACGTCTA GAAATTATCT ACGCTTGGAG ACGTTGCGAG CGGCTAATGA TGCGATTAGT
AATGCAACCA GCCAGCTACC CGCATTTCAT CTCTATGATA TTCAGGACTC GCTCCATTCA
AGTAGCGATG GCCAGCGGAT GGAAACGCAA ATTAACACCC TTAACGCTCG ATATTCTCCT
AAGTATTTTG GTTTACAGAA AGGTGTCAGC GCCTACACGT TGGTCGCAAA TCATGTTCCT
ATAAATGCAA AGATTATTGG GACTCACGAA CATGAAAGCC ATTACGTTTT CGATTTATTG
CATAACAATA CCTCTGATAT AAAGCCAGAA CGGCATTCCA CTGACACCCA TGGCACCAAT
CAGGTTAATT TTTGGATTTT GCATGCATTT GGATATCATT TTGCACCTCG TTATCGTGAT
TTGCATAAGA AAATGGATAC GTTAGTCGGC TCACAACATC CCAATGAGTG TGGTGACTGG
CTAATAAAGC CTGCCCGAAA AACCAACGAT GAATTGATTG AACGTGAATG GCCCAATATT
CAACGTATCA TGGCATCGCT AGCTCAAAAA GATGTTACTC AAGCCACGAT TGTTCGCAAA
CTCTCGAGTT ATTCGCGTCA GAATCAGACC AAGAAAGCAT TATGGGAGTT GGAAAACATA
TGCCGAACGC TATACATTCT CGATTTTGTC GACGATGTTG GCTTACGTCA ATGTGTACAA
AAAGCATTAA ATCGTGGTGA AGCCTATCAT CGTCTCAGGC GAGCAGTTGC ATTTGTTAAC
GGTGGAAAAT TCAGAGTAAA AACGGAAGAG GAGCAACAAA TTTGGAATGA TTGCTCTCGG
CTCATCACCA ACGCGGTCAT TTACTACAAC ACAGTGTTGC TATCTCGTGT CTATGAACAG
AAGCAAAAAG TAGGTGATCA AAACGCACTG GCTCAGCTTC ACAGTATTTC GCCCGTTGCA
TGGCAGCACA TCAATATGTA TGGCAATTTT GAGTTTAGTC CATCAACCTC AAAAATAGAT
ATCGATGCAT TGGTTGCTCG ATATGCTGAA CCAGAATATT GGCAGCAAGC CTTGACGGAT
AGTGAGACGC CAAGCGTTGA TTTTTAG
 
Protein sequence
MKNDVRRLSI LSTDEIDELF GLPHFSDDDR RLYFDLSAKE RELFDNTRTF SVAAHLVLQL 
GYFKAKRQFF SYEQESSVLN DLDYIAALYF PTKTLSRLKS PSRPIRAEQQ RAILDLFQYK
QCDNEVKVDL EDKAQRVAML STQPIFIFRE LTQYLALHRI VMPSYRYMQE MIGRVVAYER
TRIARLLSTC MTSLIDQQLA ALLRAESGVF RVSALKHEAK DFSYKELRHE VARRQFFQPL
HEFAKQFLIT AGISNESGKY YASMVKFYTT YKLQRMKKET AQLYLLFFAF HRFQQINDNL
IEALLHWVDQ YEKQAKRAAE EAMNNAVTNA AKNLQAAGHV LSLFTDDTIT DDTPFSIIKE
KAYALLEQKR FPLVADYLRN IAFDKTAFEW LHYTKLSATF KRNLRQLFTD LDFAGRVEDS
PLLEAIGFLQ NLLRTEKSPR QTDPNAFPTE IIPKGLRRYL FSKEGKTFKT LDVDRYEFLV
YRLLRNSLEA GDVYVKHSNE FRRFEDDLIS DLRWQDKERV LQDIGAPILL APIQDTLAVF
HTMLAARYSA INQHISDGVN KHIKVIGAAE KRRWKLLYPS SDESVNSDFY SQLPGIGIAD
LLWFVAGNTG FLNAFTHVLD RYVKHEADPR EIFACIVAMG TNMGLAKMAE VSGLSSASMA
GTSRNYLRLE TLRAANDAIS NATSQLPAFH LYDIQDSLHS SSDGQRMETQ INTLNARYSP
KYFGLQKGVS AYTLVANHVP INAKIIGTHE HESHYVFDLL HNNTSDIKPE RHSTDTHGTN
QVNFWILHAF GYHFAPRYRD LHKKMDTLVG SQHPNECGDW LIKPARKTND ELIEREWPNI
QRIMASLAQK DVTQATIVRK LSSYSRQNQT KKALWELENI CRTLYILDFV DDVGLRQCVQ
KALNRGEAYH RLRRAVAFVN GGKFRVKTEE EQQIWNDCSR LITNAVIYYN TVLLSRVYEQ
KQKVGDQNAL AQLHSISPVA WQHINMYGNF EFSPSTSKID IDALVARYAE PEYWQQALTD
SETPSVDF