| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4531 |
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| Symbol | |
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| ID | 5756366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009998 |
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| Strand | - |
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| Start bp | 8087 |
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| End bp | 8827 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290890 |
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| Product | type-F conjugative transfer system pilin assembly protein TrbC |
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| Protein accession | YP_001556948 |
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| Protein GI | 160872941 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TTGAGACCAA ATTACCAACA ACATATACCG CTTTATGCAC AAAAATTGTG
GATAACAGCC TATTTTCACA TTCATTTAAA GGCTTAGCCC TGCTCGTGAG TTTATGGTGC
CTTGGATCAA TTTCACAGGT GTTCGCCCAA ACGGATTACA GTATTGACGA ATTAAAAGCG
CTGTCGATGC GAGAACGCCA CACATTACCC CCACTGAACG TAGACCAAGC CGCACTGTTT
GATAAAGCTC GTCAGTTCGA AGCGCAAAGC AAAGGCCAAT TAGACAACGC GCTATCACCA
TTGCTCGATG CAAAGCCCAA CCCCAGTGCC GATGCTAATG GTGTGATGGT ATTTGTGTCA
TTGGGTATGC CTGCCACCAG TTTGCAGCAA TTGCTCATGC AAAGCGCAGA CTTACAAGTG
CCACTCATTG TGCGCGGTGT ACTGCCACAA GGCTTTACCG CCACTGTTAA ACAGATGAAT
CACCTCATCG ATAACAAAGG TAAAACCATA CAGAGCGGGT TTGCCATCAA TCCCCAGTGG
TTTACGCAAT TCGGCATTAC CCAAGTACCC GCCTTTGTTG CGGTAAGACC CAACAAATGT
CAGGCAAAAC AGCCCTGCAG TACCGATGAC TTTGACGTGA TTTACGGCAA CGTTTCGTTG
TATGACGCGC TGAACTTACT TGCACAACAC GGCAGCATTC CCGATGTGGC AGCAAAGACA
TTAGCAAAGG GGGCGAAATG A
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| Protein sequence | MKKFETKLPT TYTALCTKIV DNSLFSHSFK GLALLVSLWC LGSISQVFAQ TDYSIDELKA
LSMRERHTLP PLNVDQAALF DKARQFEAQS KGQLDNALSP LLDAKPNPSA DANGVMVFVS
LGMPATSLQQ LLMQSADLQV PLIVRGVLPQ GFTATVKQMN HLIDNKGKTI QSGFAINPQW
FTQFGITQVP AFVAVRPNKC QAKQPCSTDD FDVIYGNVSL YDALNLLAQH GSIPDVAAKT
LAKGAK
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