| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4500 |
|---|
| Symbol | |
|---|
| ID | 5756335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 5322467 |
|---|
| End bp | 5323372 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641290859 |
|---|
| Product | naphthoate synthase |
|---|
| Protein accession | YP_001556917 |
|---|
| Protein GI | 160877601 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
|---|
| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.509191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.116271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC AAGTATCAGA CATTTTTGAT CCCACCCTAT GGGATGAAGT CAGTGGATTT
CAATTCGACG ACATCACCTA CCACAGAGCT AAAGCCCACG GCACAGTTCG CATTGCCATT
AACCGCCCTG AGTGCCGCAA CGCCTTCAGA CCTAAAACCG TTGATGAGTT ATTTATCGCA
CTCGATCATG CGCGCCAATG GTCTGATGTA GGTTGTGTAC TGCTAACAGG TAATGGTCCT
TCGGCAAAAG ATGGTGGCTG GGCGTTCTGT TCGGGTGGCG ATCAACGTAT TCGCGGCAAA
GATGGCTATA AATATGAAGG CGCCGAAGAA GGTAAAGCCG ATCAAGCCAG AATGGGCCGC
TTACATATAT TAGAAGTGCA ACGCTTGATC CGCTTTATGC CTAAAGTGGT CATCGCCGTT
GTGCCGGGTT GGGCGGTAGG TGGCGGCCAT AGCTTACACG TAGTATGCGA CTTAACCTTA
GCCTCGAAAG AACACGCGAT ATTTAAGCAG ACTGATCCCG ACGTAGCGAG CTTCGACTCA
GGTTATGGCA GCGCATATCT TGCCAAGATG ATAGGTCAAA AACGTGCCCG CGAAATCTTC
TTCTGTGGTT TTAACTACAG CGCCGATGAA GCCTTCGACA TGGGTATGGT CAATAAATCC
GTTCCCCATG CAGAGCTAGA AACCGAGGCA TTAATGTGGG CCAAAGAGAT TAACTCTAAG
TCGCCTACGG CAATGCGTAT GCTTAAATAC GGTTTTAACA TGACAGATGA TGGTATGGTC
GGTCAGCAAT TATTCGCCGG TGAAGCGACG CGTTTAGCCT ATGCGAGCGC CGAAGCGCAG
GAAGGGCGCG ATGCCTTCCT CGAGAAACGC GATCAAGATT TCTCCGCCTT CCCTTGGCAT
TACTAG
|
|---|
| Protein sequence | MTQQVSDIFD PTLWDEVSGF QFDDITYHRA KAHGTVRIAI NRPECRNAFR PKTVDELFIA
LDHARQWSDV GCVLLTGNGP SAKDGGWAFC SGGDQRIRGK DGYKYEGAEE GKADQARMGR
LHILEVQRLI RFMPKVVIAV VPGWAVGGGH SLHVVCDLTL ASKEHAIFKQ TDPDVASFDS
GYGSAYLAKM IGQKRAREIF FCGFNYSADE AFDMGMVNKS VPHAELETEA LMWAKEINSK
SPTAMRMLKY GFNMTDDGMV GQQLFAGEAT RLAYASAEAQ EGRDAFLEKR DQDFSAFPWH
Y
|
|---|
| |