Gene Sbal195_4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4493 
Symbol 
ID5756325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5306520 
End bp5307860 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content45% 
IMG OID641290849 
Productcoproporphyrinogen III oxidase 
Protein accessionYP_001556910 
Protein GI160877594 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR00538] oxygen-independent coproporphyrinogen III oxidase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.320649 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA AGTATAACTA CAGCGGTCCC CGTTATACCT CTTACCCAAC GGCATTGGAG 
TTCGATGACA CATTCACCGA ACAAAACCTG CTAACGGCCA TTGAAAATAG CAAAAGCGAT
AAACTGTCGC TGTATATTCA TATCCCGTTC TGCGCCAAGC TTTGTTATTA CTGCGGCTGT
AATAAAGTCA TCACCCGCCA CCAACACAAA GCCGATCAGT ACATTGAATA TTTAAGCCAA
GAAATTATCA AACGTGCGCC CCTGTTTAAA CATTACAGTG TGACCCAAAT GCATTGGGGC
GGCGGTACAC CTACGTTCTT AAATCCTGAG CAGATTCTTA AACTTACGTC ATTGATTAAA
GCTAACTTTA ACTTTGCGGA AGAAGGCGAG TACTCGATTG AAGTCGATCC TCGCGAGATA
GAGCTGTCAA TGCTCGACAC GTTGAAAGAA GCGGGCTTCA ACCGGATCTC CATCGGCGTA
CAAGATTTCA ATAAAGAAGT ACAAATTGCC GTTAATCGCG AACAAGACGA GCAATTTATC
TTCGACTTGA TGGCCAAAGC GAAAGCCATG GGTTTTGTGT CAACCAACAT AGATTTAATC
TATGGTTTGC CACACCAAAC GCCAGAAACC TTTGCCGTCA CTATGCAGCG CGTTTTAGAT
TTATCGCCTG ACCGTCTATC GGTATTTAAC TATGCTCACT TACCTGCGCG CTTTGCCGCT
CAACGTAAGA TCAAAGATGA GCATTTACCT TCGCCAAAAC AAAAACTCGA AATGCTGCAC
CAAACTATCG AGACCTTAAC TGGCGCTGGC TACCAATATA TCGGTATGGA CCACTTTGCT
AAACCCGATG ACGAGTTAGC CAAGTTACAG CGCGAAGGCA GACTGCACCG CAACTTCCAA
GGTTATACCA CCCAAGAAGA ATGCGATTTG TTAGGTCTTG GCGTGTCATC CATCAGCCAG
ATTGGCGACT GCTATGCGCA AAACCAGAAA GATATCCGCC CTTACTATGA AGCCATAGAT
AAGGAAGGCC ATGCTTTGTG GAAAGGTTGT AGCCTGAACC GTGACGATGA AATCCGCCGC
GTAGTGATTA AACAGCTGAT TTGCCACTTC GAACTAGATA TGGCGAAAAT TGATGAGAAA
CTGGGGATTA ACTTCGAAAC CTATTTCGCG GAAGATCTTA AGTTAATGCA GACATTTATC
GATGACAAGT TAGTTGAAAT CGTCGACAGA CAGATCACTA TCAGCCCAAC TGGCCGTTTA
TTGATCCGCA ATATCTGTAT GTGTTTCGAC CTTTACTATC GTCAAAAAGC GCGTCAGCAA
CAGTTCTCGC GCGTGATCTA A
 
Protein sequence
MIEKYNYSGP RYTSYPTALE FDDTFTEQNL LTAIENSKSD KLSLYIHIPF CAKLCYYCGC 
NKVITRHQHK ADQYIEYLSQ EIIKRAPLFK HYSVTQMHWG GGTPTFLNPE QILKLTSLIK
ANFNFAEEGE YSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKEVQIA VNREQDEQFI
FDLMAKAKAM GFVSTNIDLI YGLPHQTPET FAVTMQRVLD LSPDRLSVFN YAHLPARFAA
QRKIKDEHLP SPKQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAKLQ REGRLHRNFQ
GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYEAID KEGHALWKGC SLNRDDEIRR
VVIKQLICHF ELDMAKIDEK LGINFETYFA EDLKLMQTFI DDKLVEIVDR QITISPTGRL
LIRNICMCFD LYYRQKARQQ QFSRVI