Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4493 |
Symbol | |
ID | 5756325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 5306520 |
End bp | 5307860 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641290849 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001556910 |
Protein GI | 160877594 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.320649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA AGTATAACTA CAGCGGTCCC CGTTATACCT CTTACCCAAC GGCATTGGAG TTCGATGACA CATTCACCGA ACAAAACCTG CTAACGGCCA TTGAAAATAG CAAAAGCGAT AAACTGTCGC TGTATATTCA TATCCCGTTC TGCGCCAAGC TTTGTTATTA CTGCGGCTGT AATAAAGTCA TCACCCGCCA CCAACACAAA GCCGATCAGT ACATTGAATA TTTAAGCCAA GAAATTATCA AACGTGCGCC CCTGTTTAAA CATTACAGTG TGACCCAAAT GCATTGGGGC GGCGGTACAC CTACGTTCTT AAATCCTGAG CAGATTCTTA AACTTACGTC ATTGATTAAA GCTAACTTTA ACTTTGCGGA AGAAGGCGAG TACTCGATTG AAGTCGATCC TCGCGAGATA GAGCTGTCAA TGCTCGACAC GTTGAAAGAA GCGGGCTTCA ACCGGATCTC CATCGGCGTA CAAGATTTCA ATAAAGAAGT ACAAATTGCC GTTAATCGCG AACAAGACGA GCAATTTATC TTCGACTTGA TGGCCAAAGC GAAAGCCATG GGTTTTGTGT CAACCAACAT AGATTTAATC TATGGTTTGC CACACCAAAC GCCAGAAACC TTTGCCGTCA CTATGCAGCG CGTTTTAGAT TTATCGCCTG ACCGTCTATC GGTATTTAAC TATGCTCACT TACCTGCGCG CTTTGCCGCT CAACGTAAGA TCAAAGATGA GCATTTACCT TCGCCAAAAC AAAAACTCGA AATGCTGCAC CAAACTATCG AGACCTTAAC TGGCGCTGGC TACCAATATA TCGGTATGGA CCACTTTGCT AAACCCGATG ACGAGTTAGC CAAGTTACAG CGCGAAGGCA GACTGCACCG CAACTTCCAA GGTTATACCA CCCAAGAAGA ATGCGATTTG TTAGGTCTTG GCGTGTCATC CATCAGCCAG ATTGGCGACT GCTATGCGCA AAACCAGAAA GATATCCGCC CTTACTATGA AGCCATAGAT AAGGAAGGCC ATGCTTTGTG GAAAGGTTGT AGCCTGAACC GTGACGATGA AATCCGCCGC GTAGTGATTA AACAGCTGAT TTGCCACTTC GAACTAGATA TGGCGAAAAT TGATGAGAAA CTGGGGATTA ACTTCGAAAC CTATTTCGCG GAAGATCTTA AGTTAATGCA GACATTTATC GATGACAAGT TAGTTGAAAT CGTCGACAGA CAGATCACTA TCAGCCCAAC TGGCCGTTTA TTGATCCGCA ATATCTGTAT GTGTTTCGAC CTTTACTATC GTCAAAAAGC GCGTCAGCAA CAGTTCTCGC GCGTGATCTA A
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Protein sequence | MIEKYNYSGP RYTSYPTALE FDDTFTEQNL LTAIENSKSD KLSLYIHIPF CAKLCYYCGC NKVITRHQHK ADQYIEYLSQ EIIKRAPLFK HYSVTQMHWG GGTPTFLNPE QILKLTSLIK ANFNFAEEGE YSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKEVQIA VNREQDEQFI FDLMAKAKAM GFVSTNIDLI YGLPHQTPET FAVTMQRVLD LSPDRLSVFN YAHLPARFAA QRKIKDEHLP SPKQKLEMLH QTIETLTGAG YQYIGMDHFA KPDDELAKLQ REGRLHRNFQ GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYEAID KEGHALWKGC SLNRDDEIRR VVIKQLICHF ELDMAKIDEK LGINFETYFA EDLKLMQTFI DDKLVEIVDR QITISPTGRL LIRNICMCFD LYYRQKARQQ QFSRVI
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