Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4486 |
Symbol | engB |
ID | 5756318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 5300816 |
End bp | 5301475 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641290842 |
Product | ribosome biogenesis GTP-binding protein YsxC |
Protein accession | YP_001556903 |
Protein GI | 160877587 |
COG category | [R] General function prediction only |
COG ID | [COG0218] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00401889 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0167985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGAAT CTCGTATAGA TTTTCGTAGG GCAAAGTTTT TAATCAGTGC ACCTGACATT GCACATTTGG ATCAATATCT GCCCGGCGAT GTTGGAGTTG AGATTGCATT TGCTGGCCGC TCTAATGCTG GAAAGTCTAG TGCACTCAAT GCATTAACTG AGCAAAAAAG TTTAGCAAGA ACCAGTAAAA CCCCTGGTCG AACTCAATTA ATTAACGTAT TTGAGTTAGA TGCTCAGCGT CGTTTAGTTG ACTTACCTGG CTATGGTTTT GCACAAGTCC CGCTTGCGTT GAAAAATAAA TGGCAGCAGG CATTAGGTGA ATATTTGCAA AAACGCGCTT GTTTAAGTGG CGTGGTTGTC TTGATGGATA TACGTCATCC ACTAAAAGAT CTCGATATGC AGATGATCGA GTGGGCGGTT GCCAGTGAAA TCCCTGTGTT AGCTTTGCTG ACCAAGTCAG ACAAATTAGC TCAAAGCGCT AAGATGAAAA CCGTAAATGA AGTGCGTCTG GCGTTGAGTG AGTTTGGTGA CTGGGTACAA GTTGAGCCTT TCTCATCGCT TAAAGGAACC GGTAAGCCTA AAGTGTTGGC TATTCTAAAT GAATGGTGCC ATCCGCAATG GTTGACCGAT GAGTTAGATG CGGCGAACAA CGCCGAATAA
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Protein sequence | MTESRIDFRR AKFLISAPDI AHLDQYLPGD VGVEIAFAGR SNAGKSSALN ALTEQKSLAR TSKTPGRTQL INVFELDAQR RLVDLPGYGF AQVPLALKNK WQQALGEYLQ KRACLSGVVV LMDIRHPLKD LDMQMIEWAV ASEIPVLALL TKSDKLAQSA KMKTVNEVRL ALSEFGDWVQ VEPFSSLKGT GKPKVLAILN EWCHPQWLTD ELDAANNAE
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