Gene Sbal195_4452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4452 
Symbol 
ID5756283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5261541 
End bp5262278 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content44% 
IMG OID641290807 
Producthypothetical protein 
Protein accessionYP_001556869 
Protein GI160877553 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.485601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAT TCTTTGCTAT TTTTTGCTTA CTTTTAGCCA TGTTACCTGT ATCCATCTAT 
GCCGCCCAGC CGATAGTTGT CAATGTGGCG ACGGCTTCGT GGGAGGATTT TGCCAATCGT
GATGAAACGG GTTACTACTT CGAGTTACTC CAACGGATTT TCCCCGAGCC AGAATGGCAA
CTCAAGGTGC AGTTTATGCC CTTTGCCCGC AGTTTATATC TTGTTGAGCA CAATCGTACC
GATATCACCC TCAGTGTTTA TAAGGGAGAT ACTAAAAAGG CGCTGCTAAC TGAGAATACG
GTTGAAGTAG ATTCTATCGA TGTAGCGGTC ACCCCCGAGT TAGCGGCGAC TTGGACAGGG
CTTGAAAGTC TATCCCATAA AAGGGTTCAG GCCATGTTGG CCTATCGATA CAATATGCTG
ACGCCTGTAC CTATGTACTA TGAAGAAAGC AGCGATATGT TGACTATGCT CAATAGCTTA
AACGCAGGAC GCATAGATGC CGTGTTGGAT TACAAACCTA ATTTGCTTAT GTATGTGCCT
AAGCTGAAGG CGCCACAAAA TTTTGTGATT ATTCAAGGCG TACTCAAGGC CGAAACCTAT
TTTGCCTTTG CAAACACTGA AAAAGGCCAG ATGCTGAAAC AACATTTTGA CCTTGCACAT
AAGCGTTTAA TCGATTCGGG AGAGCAGGAC AGGCTTTATC TTGAAATACT TGAAAAAAGA
AAGGCTGATG ATGAATAG
 
Protein sequence
MRRFFAIFCL LLAMLPVSIY AAQPIVVNVA TASWEDFANR DETGYYFELL QRIFPEPEWQ 
LKVQFMPFAR SLYLVEHNRT DITLSVYKGD TKKALLTENT VEVDSIDVAV TPELAATWTG
LESLSHKRVQ AMLAYRYNML TPVPMYYEES SDMLTMLNSL NAGRIDAVLD YKPNLLMYVP
KLKAPQNFVI IQGVLKAETY FAFANTEKGQ MLKQHFDLAH KRLIDSGEQD RLYLEILEKR
KADDE