Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4449 |
Symbol | |
ID | 5756280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 5256060 |
End bp | 5257430 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641290804 |
Product | ABC transporter related |
Protein accession | YP_001556866 |
Protein GI | 160877550 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCC TAGCGCTCGA AGGCGTTAGC TTCAACTATG GCAGCCAGTT ACCGACTGTA TTGCAGGAGG TTAACTTGGC GATTGGCACC GGCCAATGCC ATTGCGTGAG CGGTCATACG GGCTCTGGGA AATCGAGTCT GCTAAACCTA CTGGCGGGCG TGTTAAATCG CCCGCATGAA GGTGACATCT GGCGTTACCC ACAACTGGTT ACGGGTCTGG TGATGCAGGA CCCGCAAACC CAGCTCCTTC GGCAAACCGT TGGCGCCGAA GTGGCTTTCG CCATAGAAAA TCTTGGCATT CCCGCTGAGC AAATGCTACC TAAAGTGCAA TTGGCACTAC GGCGCGTGGG CTTGTATCTG CGTCTCGATA CACAAGTCAG CACGCTTTCC CTCGGTCAAA AATATCGTTT AATGATTGCC GCCCAATTGG TGTGCGAGCC GCATTTACTG CTGCTCGATG AACCTTGGGC GCAACTCGAT GATCACGGTG TGAGTGAGCT GCTGGTCGTA CTTCGCAACC TTATTCAAGA TGGCATGGCG CTAGTGTTGG TTGAACATAA CGCCTCGGCC TTCGCTGAGA TTATTCAGCA TTACTGGCAG TTAGAGGCGG GCAAGCTATC CGAAGGCATC TATACCGTGA ACGATGCGCC GCAAATTGAG GCGCCTGCGT GGCGAAATCA GCCTAAGTTT GAGCATTTGG GCAAAGTCTT GGTCAGCGCC GAAGCCTTTG ATTTTGGATT CGATGCTTGT CCCATTTTAT TTGCGTGTCC GCACGGATTC CAACTGCAGG CGGGTGAGAT AGTGACCTTA GTGGGAGATA ACGGCTCAGG TAAAACTAGT TTGTTGAAAA CCATAGCTGG CGTACTCAGT TCAAGGCAGC GTCTTCCGCT TAAAGTGCTC GGGCGAAGAC CTAAGTTGGG GATTTATGGC GCTGAGCTGG GTCTGCTGAT GCAAAGGCCG AGTCGACAAT TATTCGAGAC CAGCGTGCTC GCCGAAATGC AGTTTAGCCT TAGGCGTTTT GAACTCCCCA AAGAACGCGC GGCGCAGATG TTGGATGAAT TGGATTTATT TAGCTTAGCT CAGCTGTCGC CCCACAAATT ATCCTACGGC CAACAGCACT TGATTGCCTT AGCGTCACTC GCCTGTTTAC GCCCTAAAGT ATTGCTTTTG GACGATCCAT TGGCGGGGAT GGATAAGCAT TACTACGGCA AAGTGTGGTA CTTGCTGAAG CGGTTAAGCT CTCAAGGTTG CGCTATTTTG CTCAGCAGTC ACAGAAGCAT TGAACACAGC GCTGTATCAC GGCAATTGAG TTTGCGTAAT GGTTTATTGG TGGAGGAATT GATTGAAACA GGAGAGCGTT ATGTGGGCTA G
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Protein sequence | MKLLALEGVS FNYGSQLPTV LQEVNLAIGT GQCHCVSGHT GSGKSSLLNL LAGVLNRPHE GDIWRYPQLV TGLVMQDPQT QLLRQTVGAE VAFAIENLGI PAEQMLPKVQ LALRRVGLYL RLDTQVSTLS LGQKYRLMIA AQLVCEPHLL LLDEPWAQLD DHGVSELLVV LRNLIQDGMA LVLVEHNASA FAEIIQHYWQ LEAGKLSEGI YTVNDAPQIE APAWRNQPKF EHLGKVLVSA EAFDFGFDAC PILFACPHGF QLQAGEIVTL VGDNGSGKTS LLKTIAGVLS SRQRLPLKVL GRRPKLGIYG AELGLLMQRP SRQLFETSVL AEMQFSLRRF ELPKERAAQM LDELDLFSLA QLSPHKLSYG QQHLIALASL ACLRPKVLLL DDPLAGMDKH YYGKVWYLLK RLSSQGCAIL LSSHRSIEHS AVSRQLSLRN GLLVEELIET GERYVG
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