| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4423 |
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| Symbol | |
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| ID | 5756254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 5226462 |
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| End bp | 5227958 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290778 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001556840 |
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| Protein GI | 160877524 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACC TCGCTTACAT TTCCTTAGCT ATCTACTTTA TCGTTATGCT CGCCATTGGC
TTATTCGCTT ACAAAAAATC CACCAGCGAT GTGTCAGGCT ATATTCTTGG CGGCCGTAAG
GTAAGTCCAC AGGTCACCGC ACTCTCAGCG GGTGCATCTG ACATGAGTGG CTGGATGCTA
ATGGGTCTTC CCGGTGCTAT GTTTTTGGTT GGTTTCGAAA CCATTTACAT CGCACTTGGG
CTATTGATTG GTGCTCTAAT CAATTACTTG GTCGTCGCAC CAAAACTTAG GGTTTATACC
GAGGTGGCGG ACAACGCCCT CACTATCCCG GAGTTTTTTG CTAAACGCTT CGGCAATGCC
AACGGCAGTA TCCGTATTAT TTCGGCCGTG ATCATTGTGA TCTTCTTTAC CTTGTATACC
TCAGCAGGTT TAGTGGCTGG CGGTAAATTG TTTGAGTCAG CATTTGGCCT GAACTACGAC
ATAGGTTTAG TCGTCACACT AGCGGTTGTG GTTTCTTATA CCCTGTTAGG TGGATTCTTG
GCAGTGAGCC TCACTGACTT TGTCCAAGGC TGTATTATGT TTGTCGCCTT AGTCTTAGTT
CCTGTCGTGG CATATCAAGA ATTTACCAGC GCTGACACTA TGTTGAACTT TGCGTATCAG
TCGATTCCAC ACTTCACCGA TGCGATGCAA AACGTCACTA TGTTAGGGCT TATCTCAAGC
TTATCTTGGG GACTCGGTTA CTTTGGCCAA CCGCATATTA TTGTGCGTTT TATGGCGATT
CGTTCAGTAG CTGACATTAA AACCGCCAGA CACATAGGTA TGGGCTGGAT GACAGTGACC
ATTGTGGGTG CACTGGCAAC AGGTCTTGTC GGTATTGCTT ACGCCAATAA ATTTGGTATG
AAGCTGACCG ATCCTGAAAC CATCTTTATC GTATTTTCTG AGTTGTTGTT CCATCCGATC
ATTAGTGGCT TCTTACTGGC CGCCATTCTG GCCGCGATCA TGAGCACCAT TTCATCGCAG
CTATTAGTGT CATCAAGCTC GCTAACGGAA GATATCTATC GCGTGATTTC TAAGAAAGAA
TCTACCGAGA AAGACATGGT GAAAATGGGA CGCTTTGGCG TAGCAGGCGT AGCAATTGTC
GCGAGTCTAC TGGCGCTCGA CCGTTCTAGC AGTGTGCTAT CACTGGTGAG TAATGCATGG
GCAGGATTCG GTGCCGCCTT CGGTCCGTTA GTTTTGTTTA GCTTGTACAA AGCAAACCTA
ACCCACAAAG CCGCGATTGC CGGCATAGTG TCAGGCGCTG CTACAGTGTT GTTTTGGATT
TATGCCCCGG TATTGGCAGA TGGACAAGCC TTAACCACAG TGGTGTATGA AATGATCCCC
GGCTTTGCCG TGAGCAGTGT GGTGATTTGG ATAGTCTCGT TACTCGATAC TGATCCCTGT
GCCAAAACCA CTAAATTATT CCATAAGGCT GGCCGTGTTT TAGCCGAAGA CAGATGA
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| Protein sequence | MNYLAYISLA IYFIVMLAIG LFAYKKSTSD VSGYILGGRK VSPQVTALSA GASDMSGWML
MGLPGAMFLV GFETIYIALG LLIGALINYL VVAPKLRVYT EVADNALTIP EFFAKRFGNA
NGSIRIISAV IIVIFFTLYT SAGLVAGGKL FESAFGLNYD IGLVVTLAVV VSYTLLGGFL
AVSLTDFVQG CIMFVALVLV PVVAYQEFTS ADTMLNFAYQ SIPHFTDAMQ NVTMLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVADIKTAR HIGMGWMTVT IVGALATGLV GIAYANKFGM
KLTDPETIFI VFSELLFHPI ISGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYRVISKKE
STEKDMVKMG RFGVAGVAIV ASLLALDRSS SVLSLVSNAW AGFGAAFGPL VLFSLYKANL
THKAAIAGIV SGAATVLFWI YAPVLADGQA LTTVVYEMIP GFAVSSVVIW IVSLLDTDPC
AKTTKLFHKA GRVLAEDR
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