Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4419 |
Symbol | |
ID | 5756250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 5220834 |
End bp | 5222504 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641290774 |
Product | UvrD/REP helicase |
Protein accession | YP_001556836 |
Protein GI | 160877520 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTAGAC ACGATAACTG GAAACCTGCG GATGGGCTAA CTCTTGAACC AAATGCTGAA CGAGCAGTAA AAGAATGCGA AAAAAATTTA GCCCTAACAG CAGGTCCTGG TGCTGGTAAA ACAGAAATGC TTGCTCAGCG AGCTGACTTC TTACTCCGAA CAGGCACTTG CCGCTATCCG AAGCGAATTT TGGCAATTTC ATTTAAAGTT GATGCCAGTT CAAACCTAAA AGATCGGGTA ACTCGCAGGA GTGGAGATGA ATTATCATCT CGATTTGATA GTTACACGTT TCATGCATTT GCTAAGCGAA TTATTGACCG TTTTCGCCCC ATACTCACAG GCATCTACAC GTTAGATTCA GAATATACCA TTGGAAGTCC TAGAACGCCT CAGAAGCAAA TAGAATTTGC AGATTTGGTT CCATTAGCAA CTCGTATCCT CCAAAGTTCT GCTGTAGCTA GAAATGCCAT AAGACAAACA TATACTGATG TGTTCTTGGA TGAATTTCAG GATTGTACAG ATATTCAGTA TGAGTTTCTA AAAATAGCTT TCCAAAGCAC AACAATTCGA TTAACAGCTG TTGGAGATAC GAAGCAAATA ATTATGGGGT GGGCAGGTGC GCTTGATGGG ATTTTTGTCA CTTATGCTCA AGATTTTCAA GCATTACCAT TAAACATGTA TCGTAACTTC CGCTCAAAGC CACAGCTTCT TCGGTTACAA AACGAAATCA TCCGGACACT AGATCCTGCC TCGGTGATGC CGAATGAACT CATTGTTGGC AATGAAGGAG AAATACGAGC ATTTCAATTT GAAACAAGCC AACGTGAAGC TGAATATCTA GCCGAACAAA TTCAAAATTG GATAATCGTA GATAATATCC CTCCAAACGA GATTGCTATA CTCATACGAA ATCAACCACA TTTATATGCC CAACATCTAA TACCTGCGCT GCGAAATAGA CAAATACCTT TTAGAAACGA GCAAGAATTA CAGGATATAA CTGTGGAACC TGCTGCCCGC CTCATTGTCG ATTTCCTTCT TTGTACTTTT GGTAAACGTG AACCCGCAGC TTGGTTAAGG CTAATGAACC AATTGATCCC ATTTACCGAT GACGAAGAAG AGCAGGATAA ATATCAGCAA ATCTGGCTTA ACTTCATTCA ACGCCAGCGG AAAAGAATTA GGGAAAACCC AATAACAATA GATAACCAAA GTCGTTGGCA AAGTGTTCAA AGTTTTATTG AACTTGTCGG TATTGAAACA ATGACAGCAC TTTCACATGA CTACGAAACA GCCTCTCGTC TAAATGAAGT TCTAAGGGCA ACATTTAATA AGTTAGATGA AACCTTGGCT TCAGGCCTGA CACTACTTGA AGCACTTTGC CAGTTTACAG ATGATCAATC AGTAAGAATA TTGACCTCAC ACAAAAGTAA AGGGCTAGAG TTTGATACTG TAGTACTTTT AGGCATCGAA AATGAATGTT ACTTTGGGGC CCCTCAAGAG AACCTATGTA CCTTTTTTGT TGGAGTTTCC AGAGCTAAAT GTAAGCTATT GTTAACATTT GCAAAAGAGC GAATACGGCC AGAAGGCTTT TCTGGTCGGT GGAGTGAACA AAGAACACTT GTTAATGAGT ATGCTGGTTA TGTCAGGCCA TTTTTATCTA ACAATAACTA A
|
Protein sequence | MIRHDNWKPA DGLTLEPNAE RAVKECEKNL ALTAGPGAGK TEMLAQRADF LLRTGTCRYP KRILAISFKV DASSNLKDRV TRRSGDELSS RFDSYTFHAF AKRIIDRFRP ILTGIYTLDS EYTIGSPRTP QKQIEFADLV PLATRILQSS AVARNAIRQT YTDVFLDEFQ DCTDIQYEFL KIAFQSTTIR LTAVGDTKQI IMGWAGALDG IFVTYAQDFQ ALPLNMYRNF RSKPQLLRLQ NEIIRTLDPA SVMPNELIVG NEGEIRAFQF ETSQREAEYL AEQIQNWIIV DNIPPNEIAI LIRNQPHLYA QHLIPALRNR QIPFRNEQEL QDITVEPAAR LIVDFLLCTF GKREPAAWLR LMNQLIPFTD DEEEQDKYQQ IWLNFIQRQR KRIRENPITI DNQSRWQSVQ SFIELVGIET MTALSHDYET ASRLNEVLRA TFNKLDETLA SGLTLLEALC QFTDDQSVRI LTSHKSKGLE FDTVVLLGIE NECYFGAPQE NLCTFFVGVS RAKCKLLLTF AKERIRPEGF SGRWSEQRTL VNEYAGYVRP FLSNNN
|
| |