Gene Sbal195_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4372 
Symbol 
ID5756203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5168371 
End bp5168841 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content50% 
IMG OID641290728 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001556790 
Protein GI160877474 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGC CATTTAGTCA ACGACCAAGA CTCACGGCTC ATCCTTCAAA ACGTAAAGCT 
GTGATTAGCT TAACGCCACT CATTGATGTG GTGTTTATCC TATTGGTGTT TTTTATGCTG
TCTTCCAGTT TTCTAGACTG GCGCACTGTG GCGCTCGATA CCAGCACGGC AGGTAGCCCC
GCTCCCGCTG AGCAAGCGCC ATTTTTAGTA CAAATTAGCG CAGACCAACT GCAACTAAAC
GGCGAAACGA TCACACTGGA AGCATTACAG CAAAAAGCAC AAGGGCGCCA GCCTGCAAGC
CAGATAGTGA GCCTACAGCC GCAGGCGGAT ACTCCAGTAC AAAGGTTAGT ACAGGTATTG
GATGCACTTA ATGCCGCAGG GATTACGCCG CTAACACTGG TAGAAGACTC CAATTGGCAA
CCCGCACCTG CGACGAAAGC GGACGGCAAT AACATGGAGA ACAACCACTA A
 
Protein sequence
MQAPFSQRPR LTAHPSKRKA VISLTPLIDV VFILLVFFML SSSFLDWRTV ALDTSTAGSP 
APAEQAPFLV QISADQLQLN GETITLEALQ QKAQGRQPAS QIVSLQPQAD TPVQRLVQVL
DALNAAGITP LTLVEDSNWQ PAPATKADGN NMENNH