Gene Sbal195_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4365 
Symbol 
ID5756196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5159919 
End bp5160662 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content39% 
IMG OID641290721 
Producthypothetical protein 
Protein accessionYP_001556783 
Protein GI160877467 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAGT TTCTGCTGTT CCTGATTTTA ACTATGAGTG CCTTTGTTTC GGCTGCAAAC 
CAAGATGTTC TTATCGGTAG CGGAGAATGG TCTCCGTATG CTGGCGCTAA ATTGAAAGGA
TTGGGTTTTT TAAACGATGT GGTCACAATC GCTTTTGAGC AGGAAGGAAT TACCGCAAAA
TTCGAGTTCA AACCTTGGGC TCGTATTGAA GTCGAAACCG GTAATGGGTA TTTTCTCGCG
TCACCCGGTT GGTCCATTCA AGAAGATCGT AAAGCCCAAT ATCTGTTCAG TAAGAAACCG
ATAATCGTTT CTCGCAGCGT ATTTATTGAA CGAATTGATA GTCAGTTTGA TTGGAAGATC
ATGAGTGATC TTAAACAATT TACTATCGGG AGCAACCGAG CCGATTACTA TGTTAAAGCA
TTGACTGAGA TAGGAGTTAA AGTTCAAGAG TTAAACGAAT ACCCACAGGG AATCAAGATG
CTACTTGCTA AACGTTTTGA CGCGTTCATT GTAAATGAAG CCGTGGGGCT GAAACTGATA
CGCGATTTAT CTGCTGAAGA ACAAGCTAAA ATTCAAATTC ACCCTTTAGC GTATGATGAA
AATTTCTCCT TCCTCATGTT TTCTAAAAAT TACCCTAATG TCGAAGCTTT TGTAGAAAAG
TATGATTCTG GCTTTGAAAA AATACAGAAA TCGGGGCTAT ATCAAACAAT GGTTCAAGAT
TTATATAAAG GTAAATATGA TTGA
 
Protein sequence
MSKFLLFLIL TMSAFVSAAN QDVLIGSGEW SPYAGAKLKG LGFLNDVVTI AFEQEGITAK 
FEFKPWARIE VETGNGYFLA SPGWSIQEDR KAQYLFSKKP IIVSRSVFIE RIDSQFDWKI
MSDLKQFTIG SNRADYYVKA LTEIGVKVQE LNEYPQGIKM LLAKRFDAFI VNEAVGLKLI
RDLSAEEQAK IQIHPLAYDE NFSFLMFSKN YPNVEAFVEK YDSGFEKIQK SGLYQTMVQD
LYKGKYD