| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4334 |
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| Symbol | |
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| ID | 5756165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 5118357 |
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| End bp | 5120720 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641290690 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001556752 |
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| Protein GI | 160877436 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.515985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTA ATGCACATAA CATCGCTCAG ATTATCGCTC AAGAACTGAA TGTTCGTGAG
CAACAAGTTG CCGCAACCAT CACTCTGCTT GACGATGGTG CGACAGTTCC CTTCGTTGCC
CGTTATCGTA AAGAAGCCAC GGGCGGATTA GACGATACGC AACTGCGTAC CTTATACACA
CGTTTAGGTT ACCTGCGTGA GCTTAACGAC AGACGCCAAG TGATCCTGTC TAGCATCCAA
GCTCAGGGTA AGTTAACGCC AGAATTACAA AGGGCTATTG ATGACGCAGA CAGCAAGACA
CGTCTCGAAG ATTTGTATCT GCCCTTCAAA CCTAAGCGCC GCACTAAGGG CCAAATCGCT
ATCGAAGCTG GGCTTGAACC ATTAGCCGAT GCCTTGCTGG CTGACCGTAG CGCCGATGTT
GAAACCAAAG CGGCGGTTTA TATCAATAGC GAAGCGGGTT TTGTCGATGT GAAAGCTGTG
CTTGAAGGCG CGCGTTATAT CCTGATGGAG CGCTATGCCG AAGACGCGGA ATTACTGCGT
AAAGTGCGTG AACATTTAAG CCAAAACAGT GTGTTAGAAA GCCGCTTAAT TGCAGGTAAG
GAGAAAGAAG GCGCGAAATT CCGTGATTAT TTCGAGCATA CCGAACAGTT AGCTAAGATC
CCTTCTCACC GTGCGCTGGC GATGCTGCGT GGCCGTAACG AAGGTTTTTT ATCCCTATCT
ATGAATGCCG ATCCTGCTGC CGAAGCGGGC CAAGGCAGTT ATTGCGAAGT AATTATCTGC
GATCACTTAG GGCTGAAACT GGGCAATAGC AGCGTCGATC AATGGTTGAA AACTGTAGTG
ACGGCGACAT GGCGCATTAA GATTGCGCTA CAGATGGAAA CCGAGTTTAT TTCGCAAATG
CGCGAACGCG CCGAAGCCGA AGCCATTAAA GTTTTTGCCC GTAACTTAGG TGATTTATTG
ATGGCCGCTC CTGCGGGCGC GAAAGCCACC ATGGGACTCG ATCCTGGTTT ACGTACCGGC
GTGAAAGTGG CTGTGGTCGA TAACACGGGT AAGATGTTGT GCCATGCGAC GATTTTTCCG
CACGCACCGC AAAATCTGTG GGAAAAGTCG ATCCGTACTT TGGCGAACTT AGTCAAAATG
CATAAGGTTG AATTGATTGC GATTGGTAAC GGCACGGCAT CACGGGAAAC CGACAAGCTG
GCCGCTGAGC TGATTGCCGC AGTGAAAGAT ACCCATCCAC AGTTGACTAA AGTGATGGTC
AGCGAAGCGG GCGCGTCTGT GTATTCGGCA TCGGAATTGG CGGCGCTGGA GTTTCCTGAT
CTCGATGTCT CGATTCGTGG TGCTGTGTCT ATCGCGCGTC GTTTGCAGGA TCCGTTAGCC
GAACTGGTGA AAATTGAGCC TAAATCTATC GGTGTGGGTC AATATCAACA CGACGTGAGC
CAAAGCCAAT TATCGGGTTC GCTGGAAGCT GTGGTGGAAG ACTGTGTAAA CGGTGTGGGT
GTGGATCTCA ACATGGCCTC TGCGCCTTTG TTGTCGCAAG TGGCGGGTTT AAACAAGACG
TTAGCGAAAA ATGTGGTCGA TTATCGCGAT GCCAATGGTC AGTTTAAGAA TCGTAAAGAG
TTGCTGAAAG TGCCACGTTT AGGGCCTAAA GCCTATGAGC AAGCGGCGGG CTTTTTGCGT
ATTCGTGAAG GTGATAATCC ACTCGATGCC TCGTCTGTGC ATCCTGAGGC TTATTCGTTA
GTGGAAACTA TCGCTGAGAC TAAGCAAGTG GAGCTGGCGA GCCTGATGGG TAACTCAGAT
CTACTGCGCA GCATCAAACC TGAAGAGTTC ATTACGGCGG AGTTTGGTTT ACCAACTGTG
ACGGATATTT TAGCCGAGCT GGATAAGCCG GGACGCGATC CCCGTGGTGA GTTTAAAACC
GCCAAGTTTA AAGATGGTGT GGAAGAACTT AAGCACTTAA AACCTGAAAT GGTGCTCGAA
GGCGTAGTGA CCAACGTGAC TAACTTTGGT GCCTTCGTCG ATATTGGCGT GCATCAAGAT
GGACTGGTGC ATATCTCTTC ACTGACCGAC AAGTTTATTA GCGATCCCCA CACAATCGTG
AAAGCGGGTG ATGTGGTCAA AGTTAAAGTG ATGGAAGTGG ACGTTGAGCG TCGTCGTATC
GGTTTGAGCA TGCGTTTGGA TGAGGCTATC GACCAAAGCA AGTCGCAGCA AAGACCGCAC
AATCCTGCCA GAACTCATAA CAGTAAGGCA CCACAGTCAG CGAAACCTGC TGCGCGTCCT
ACGCAAAAGC AAGCACCTAA AGCACCTGCG AACGCGGCCA TGGGCAATGC CTTTGCCGAT
GCCTTCGCTA AGCTGAAAAA GTAA
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| Protein sequence | MQTNAHNIAQ IIAQELNVRE QQVAATITLL DDGATVPFVA RYRKEATGGL DDTQLRTLYT
RLGYLRELND RRQVILSSIQ AQGKLTPELQ RAIDDADSKT RLEDLYLPFK PKRRTKGQIA
IEAGLEPLAD ALLADRSADV ETKAAVYINS EAGFVDVKAV LEGARYILME RYAEDAELLR
KVREHLSQNS VLESRLIAGK EKEGAKFRDY FEHTEQLAKI PSHRALAMLR GRNEGFLSLS
MNADPAAEAG QGSYCEVIIC DHLGLKLGNS SVDQWLKTVV TATWRIKIAL QMETEFISQM
RERAEAEAIK VFARNLGDLL MAAPAGAKAT MGLDPGLRTG VKVAVVDNTG KMLCHATIFP
HAPQNLWEKS IRTLANLVKM HKVELIAIGN GTASRETDKL AAELIAAVKD THPQLTKVMV
SEAGASVYSA SELAALEFPD LDVSIRGAVS IARRLQDPLA ELVKIEPKSI GVGQYQHDVS
QSQLSGSLEA VVEDCVNGVG VDLNMASAPL LSQVAGLNKT LAKNVVDYRD ANGQFKNRKE
LLKVPRLGPK AYEQAAGFLR IREGDNPLDA SSVHPEAYSL VETIAETKQV ELASLMGNSD
LLRSIKPEEF ITAEFGLPTV TDILAELDKP GRDPRGEFKT AKFKDGVEEL KHLKPEMVLE
GVVTNVTNFG AFVDIGVHQD GLVHISSLTD KFISDPHTIV KAGDVVKVKV MEVDVERRRI
GLSMRLDEAI DQSKSQQRPH NPARTHNSKA PQSAKPAARP TQKQAPKAPA NAAMGNAFAD
AFAKLKK
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