Gene Sbal195_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4321 
Symbol 
ID5756152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp5102835 
End bp5103881 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content49% 
IMG OID641290677 
Productpolysaccharide deacetylase 
Protein accessionYP_001556739 
Protein GI160877423 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAAAC GTGTGCTGTT GGCACTCATA GGGCTAATGA CGTTTTCTGC CCATGCCGTG 
GTCATTCTGC AATATCACCA TGTGTCAGAA ACCACTCCGG CGGCCACAAG CGTGACGCCC
GCGCAATTTC GTGAGCAAAT GCAGTTTCTA GCCGATGATG GCTTTAAGGT GATCCCGCTT
TCTCAGGTAG TTGAAGCGAT AAAGCAAAAA CAAGATTTAC CTGCGAAAAC AGTCGCGATT
ACCTTCGACG ATGGTTATCG CAGCATAGCC ACTACGGCGC ATCCTATCCT AAAGGAATTT
GGATTTCCCT ACACCTTGTT TGTGGCAATT GAGCCGATTA AACAAAAGTT TACCGAGATG
ATGACTTGGG ATGAGCTGAT AACGCTATCC AAGGAAGGCG CCGATATTGC TAACCACAGT
TGGGCGCACG AACATTTGAT CCGCGCCTTA GAAAATGAAT CACAGGCGCA GTGGCTAGCG
AGGGTAAAGG CCAATGTTTT AGACACAGAA AAAGCCATTT TGGATGCCAC AGGTCACAAT
TTCAAAATGC TGGCTTATCC CTACGGTGAG TACAATCAAG CCTTGCAGGA TATGTTAACT
GAGAACGGCT TTGTCGCCTT GGGGCAACAA TCGGGTGCCG CTGGGCCCTA TTCGCCATTA
ACGGCGCTGC CGCGTTTCCC TGTTGCAGGA CAATATGCTG ATTTAAAAAG CCTTAAGGCC
AAGCTATACA GTTTAAATAT GCCTGTGATT GCGCAGAGTC CTAGTGATCC TGAGTTAAAG
GGCGGCCATT GGCGCCCAGA GCTTAAAGTC ACCCTAGATA TGAGCGATAT CTCGGCTAAG
CAAGTGATGT GTTATATCCA AGGCCAAGGT TCAAAACAGC CGACTTGGTT GAGTGAGAAC
GAGTTTAGTG TTCAAGCGGA TTTAGCCTTA CCTGCGGGTC GTTCGCGTTA CAACTGCACT
GCGCCGAGTA AGGCGCGCAA TGGCTACTAT TGGTTTTCTC AGCCTTGGGT GAGGCCAAAG
GACGATGGCT CTTGGGTCAA AGAGTGA
 
Protein sequence
MVKRVLLALI GLMTFSAHAV VILQYHHVSE TTPAATSVTP AQFREQMQFL ADDGFKVIPL 
SQVVEAIKQK QDLPAKTVAI TFDDGYRSIA TTAHPILKEF GFPYTLFVAI EPIKQKFTEM
MTWDELITLS KEGADIANHS WAHEHLIRAL ENESQAQWLA RVKANVLDTE KAILDATGHN
FKMLAYPYGE YNQALQDMLT ENGFVALGQQ SGAAGPYSPL TALPRFPVAG QYADLKSLKA
KLYSLNMPVI AQSPSDPELK GGHWRPELKV TLDMSDISAK QVMCYIQGQG SKQPTWLSEN
EFSVQADLAL PAGRSRYNCT APSKARNGYY WFSQPWVRPK DDGSWVKE