Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4319 |
Symbol | |
ID | 5756150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 5101249 |
End bp | 5102154 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641290675 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_001556737 |
Protein GI | 160877421 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC CACTCTCAAT CACCAGTAGC CTACCCACGT TCAGCGTGAC ATGGCGCGCC TATTTTGAAA TGACTAAACC TAAAGTGGTC GCACTTATGC TGCTCACTGT CTTAGTCGGC ATGTGTTTGG CCGTGCCCCA TGCTGTGCCC GTTCAACCTT TACTCGCAGG CATGCTGGGC ATTGCCATGA TGGCGGGTTC GGCGGCAGCG TTGAATCATC TGATCGATCG CCGTATCGAT GGCTTAATGG CACGCACCTA CAATCGCCCA CTACCCAAAG GGCGTATTTC GGCAACCCGC GCGTTAATTT TCGCCGCTAG CTTAGGTAGC CTTGGCTTTA TCGTCTTATA TTCCTTAGTA AATCCACTCA CGGCTTGGCT CACCTTTGCC AGCTTGATTG GTTATGCCTT GGTTTATACT GCCTATTTGA AGCGCGCGAC ATCACAAAAC ATTGTGATTG GCGGCCTTGC GGGAGCCATG CCACCCTTGC TGGGATGGAC GGCAGTGACG AACGAATTTC ACGGCCATGC ACTGTTGTTA GTGATCATCA TCTTTACGTG GACGCCGCCA CATTTTTGGG CTCTGGCCAT TCACAGACGC GCCGAATATG CCAAAGTGGA TATTCCCATG CTGCCGGTTA CCCACGGTGT CGAGTTTACT AAAACCTGTA TTCTGCTTTA CACAGTATTG CTGGCGATTG CTTGCCTATT ACCTGTGCTG GTTGGCATGT GTGGGCCCGT GTATTTTGTC TGCTCGAGTT TACTCAGCAC CGGATTTATC TATAAAGCAT GGCAACTTAA ATATCGGGAT CATGATGGTT TGGCGATGCA AGTGTTCCGC TTCTCTATCT ATCATTTGAT GTTGTTATTC ATGGCATTAC TGCTCGACCA CTATTTGTGG AACTAG
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Protein sequence | MAKPLSITSS LPTFSVTWRA YFEMTKPKVV ALMLLTVLVG MCLAVPHAVP VQPLLAGMLG IAMMAGSAAA LNHLIDRRID GLMARTYNRP LPKGRISATR ALIFAASLGS LGFIVLYSLV NPLTAWLTFA SLIGYALVYT AYLKRATSQN IVIGGLAGAM PPLLGWTAVT NEFHGHALLL VIIIFTWTPP HFWALAIHRR AEYAKVDIPM LPVTHGVEFT KTCILLYTVL LAIACLLPVL VGMCGPVYFV CSSLLSTGFI YKAWQLKYRD HDGLAMQVFR FSIYHLMLLF MALLLDHYLW N
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