| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4305 |
|---|
| Symbol | |
|---|
| ID | 5756136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 5086476 |
|---|
| End bp | 5087645 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641290661 |
|---|
| Product | ribonuclease T2 |
|---|
| Protein accession | YP_001556723 |
|---|
| Protein GI | 160877407 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG3719] Ribonuclease I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.257824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CATTTTGTTT GACCATCCGC CGGATATGGC CGCAAGCACT TTCCCTTAAA
AGCCTATCGC GTACGTTACT TGCGGCGTTC GGTTTATGCG CTGCGCTAAT CATTTCAGCA
GCACCTGCCT TTGCCGCGCC CGCAACCGGT GAGTTCGTTG CCGATAAACG CTGTGAGCTA
TTTCAATCGA AAAATAAGCA GACGAATCCA GATCAATGGC AGAGCAATAT TGGTGAGCGC
TATCCGGTAC TCGAAATCCT CGGCAACAGC GCCAAACCTG ATTGGCTGCG AGTGCGCACC
AACGCAGTGA AGTCTCCCAT GCGGTGGATC AGTGGCGCTT GTGGTCAGTA TCTTTCCAAT
GTTGCAGGCA GTAATGTATC GACACCTGCA ACAGCGGTAG AACCCGCGCA AACCACTACA
GCATCGGATA TCAAAGCCAA AAGCCGAGAC GGCCTTAAAG AGCATGGCAC ACCAGAGAAA
CGCCAAGGAG ATCAATGCCG AATCGGCGGT GAATTTGACG CCAACGTGCT GGCATTAAGC
TGGCAAAGCA CCTTCTGCGA ACTCTATGGC CGCCGCAAAG CCGAATGCCG CGCCCTCAGC
CAAACGCCAG AATCGAGCCA GTGGCAACAC TTCAGCCTGC ACGGGCTGTG GCCGAATAAA
CAACAATGCG GCACACGTTA TGGCTATTGC AGCACAGTCA AACTGCAGCC GAATGATTTC
TGTACTTATC CTGAGTTTGA ACTGAATCCA TCGGTGCGCA AAAATTTAGA AGAAGTCATG
CCAAGCGCCC AATATGGCAC CTGTTTAGAA CGCCACGAAT GGTGGAAACA CGGCACTTGC
CGTAGCCAAG ACCCTAACGA GTACTTTTTA TTGGCAACCC AGCTGACCCA AGCGGTCAAT
GCCTCGGCAT GGGTACAAAA ATTTATTCAT AACAACATAG GTAAGAGTGT CAGTAAAAGT
GAGTTAAACC AAAGTTTTGA TAGCAGTTTC GGTCAAGGTG CTCACGCTAA AATGAGCCTA
GAATGTGGCA AGGGATTACT GAGTGAAATC CGCATTAACT TGCCCGAGGT CATTAAAGCC
TCAGACTCCT TGCCTAGCCT ACTCGCCAAA GCTAACAAGG CAGGCAGAGG CTCCTGCCCT
GAGACAATCA TGATTGATAA TGCTAATTAA
|
|---|
| Protein sequence | MTKPFCLTIR RIWPQALSLK SLSRTLLAAF GLCAALIISA APAFAAPATG EFVADKRCEL
FQSKNKQTNP DQWQSNIGER YPVLEILGNS AKPDWLRVRT NAVKSPMRWI SGACGQYLSN
VAGSNVSTPA TAVEPAQTTT ASDIKAKSRD GLKEHGTPEK RQGDQCRIGG EFDANVLALS
WQSTFCELYG RRKAECRALS QTPESSQWQH FSLHGLWPNK QQCGTRYGYC STVKLQPNDF
CTYPEFELNP SVRKNLEEVM PSAQYGTCLE RHEWWKHGTC RSQDPNEYFL LATQLTQAVN
ASAWVQKFIH NNIGKSVSKS ELNQSFDSSF GQGAHAKMSL ECGKGLLSEI RINLPEVIKA
SDSLPSLLAK ANKAGRGSCP ETIMIDNAN
|
|---|
| |