| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4287 |
|---|
| Symbol | |
|---|
| ID | 5756118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 5066616 |
|---|
| End bp | 5067584 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641290643 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001556705 |
|---|
| Protein GI | 160877389 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.128947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATTA GTAACATGGA TGGCCTGGAT ATTCTGAGTT TGAAAATACT CGTTTCATTA
TATGAGAACA AGTCTGCAAC TTATGTCTCT AAGGCTCTTG ATATTCCGGC TCCTAAAATA
AGTCGTAGCC TTAAAAATCT ACGGGAAATT TTTGGTGATG AACTTTTCAT TCGTCGTAAA
TACGGACTAT TCCCCAATGA GTTTGCGACC CATTTATATC CAATCGCGAA AGAAGCCATT
GAATGTACTG ATAAGTTTCA TAAGGCCAGA GCCGCAAATG CTAACTTAGT GAAAACGCAT
ATCGAGATTG CTGCTCCCGG CTTGATTGCT TACGCTTTTC CTAAAGCCTT AATGCAGGCC
ATTAAAGATG AACAGAAGCT GATGCACATT AATATCACCC CTTGGTCTAT GCATACGACC
CAAGACATTA TTAACGGTGA TACTACGCTG GGCATTTGCT GCAATAAAAG CACGGCTGAT
GTGGCCGCCT TTGGCGATAA ACTCCTGACG ACCACTCTGC AACGCATGGA TAAGGTTTAC
CTTATTGCGA GCCGTAATCA TCCAATTTTC AAACGGGAAA TCACTTTAGA GACGATTGCA
GAATATCCCT ATGTGAATAC CGACCTCGGT AATCCCAGTT CTAAGCTCAG TCCTTACCAA
GAGTTTTGTC TGAAGAGCAA CATTAAACTC AATACTGAAA TTACCATTAC CAGTATTTCA
AGTTTGTTTG AATACCTAGG AGAGAGTCAG GCACTGTCGT TATTGCCCTA TCGCGTGGTT
TACGAGATGG TGAGTGATGT AGCTGAGCTG CACACATGCC AACTGTCGCA ACTCGAAGCC
GAACGCTTAT ATGCTCATGC CGAAGCGCCA ACCATTTTCT TAGTGCAAAA AAATCAGCCA
AGCAAAGTGA ATGATGATTT AGTGTGGCTA AGTGGACAGA TTAAAAAGAT TGTTGACCAT
ATTATTTAG
|
|---|
| Protein sequence | MHISNMDGLD ILSLKILVSL YENKSATYVS KALDIPAPKI SRSLKNLREI FGDELFIRRK
YGLFPNEFAT HLYPIAKEAI ECTDKFHKAR AANANLVKTH IEIAAPGLIA YAFPKALMQA
IKDEQKLMHI NITPWSMHTT QDIINGDTTL GICCNKSTAD VAAFGDKLLT TTLQRMDKVY
LIASRNHPIF KREITLETIA EYPYVNTDLG NPSSKLSPYQ EFCLKSNIKL NTEITITSIS
SLFEYLGESQ ALSLLPYRVV YEMVSDVAEL HTCQLSQLEA ERLYAHAEAP TIFLVQKNQP
SKVNDDLVWL SGQIKKIVDH II
|
|---|
| |