| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4276 |
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| Symbol | |
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| ID | 5756107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 5056534 |
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| End bp | 5058009 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641290632 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001556694 |
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| Protein GI | 160877378 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0803877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACGA AAACAGTCAT TAAGGATAGT GAGTTTATCC AAGATTTTTC GGCCTCCTTG
AGTGATGACT ATCTCAAGGC AAAAAGCTAT GTGCAGGATG TGCCGACTCA GTCGCTACTG
CACATTCGCA GTTTTACCCA TAAGCTCACC GAGTTACTGG GGCAAGATAA GCAAATCGCG
TTTTCGAGTC CGAATCTGTA CGATAGGATC GAGCAACTAA ATCAGCAGCG CGTTATCGAT
GTTAAGACGA CTCGCGCGCT GCATCGATTG CGGGCCGACG GTAACCGCGG CGCTCATCCT
GAAAAATATC ACCTGACTCA AGCGCAATTG CTCGCGCTGG CGCAAAAATC TATTAAAGAT
GTTTTGGCGC TAGTCGAACA CTTGTATCCC AAGGTTAAAG GCCAAGTCGC ACCTGATTAT
CGTTATGAAG CGTCTGATGC CATGACAGCG AAGGATTTAT GCTACCGCGC TGTGATGGAA
GATGACGCCG AAGCCCAGTA TCTAGTAGGA ATATCTTTTA AGACCAAGGC TCTGATACTG
AAAGAGCAAG AGCTGCAACA AGATCAAGAG TTTGCCACTT CAGCTGAAGC TACTTCTAAT
CCAGAATCTT CTGGCGTTTC ACCTCTTACT TCCCACATCA GCGCCGCTGA CAGTTTTGCC
CGTGCCGCCT ATTGGTTTGC CCTTGCGGCG CCTCGGCATA TGGAAGCGTT ACATGAGCAC
GGCGTGGCCT TGATCCACGG TTATCAAGGT GTGCCAGAGG TGGCGAAAGG TGAGCAGCTG
ATTGCGACGG CGGCCGAGGC GGGTGTCGTT AATGCGATGG CGTTATTGGG GTATTTTTAT
CTTGTCGGCA GTGAGTCGTT TCAACCCGAT AGCAAGTTAG CGCAGCAATA CTTACAGCGC
GCCGCTGAGG GTGAGCAAAC CGAAGCGATG GCGAACTTAG GTGTGCTGCA TTACCAGCAA
AAAAATCTGA CTCAAGCCTA TCATTTTATA AGCAAAGCCG CGCAAGCGGG CTATCCCCAT
GCCCAGTATC ATTTGGCATT AATGCTCGCC AATGGTGACG GTTGTACTCG AGATATGATT
GCCAGCGAGT ATTGGATGGC TGAAGCTGCC GAGCAAGGGC AACTCGATGC CATGCTGACG
CGGGCACAGC ATATGCTCAA TGACGATAAT GCCTTTGGTA GTGATTTGAC TCAGGCTGAG
GATTATCTGC GCCAAGTGAT CAAATATGGT CACAGTGTGC CTGCGATGAT CGAGCTGAGT
ATGGCATTGG CCGACGGTAT GTTAGGGCGA ATTGATGTTG TGGGAGCCGC TGCTTTGCTG
AAGTTGGCGC GACAACATGC CAATAAAAAA GAGGCCGAGA TTATCGAGCC TCTTTGGCGT
TCTCTTGCAT TACAAATTGA AAATGTACTT AAGGTAACTC AAGATCCCGC AGAAATTCAT
AGCCTTAATC GCGCACAGAC ATTACTCGTC ATTTGA
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| Protein sequence | MGTKTVIKDS EFIQDFSASL SDDYLKAKSY VQDVPTQSLL HIRSFTHKLT ELLGQDKQIA
FSSPNLYDRI EQLNQQRVID VKTTRALHRL RADGNRGAHP EKYHLTQAQL LALAQKSIKD
VLALVEHLYP KVKGQVAPDY RYEASDAMTA KDLCYRAVME DDAEAQYLVG ISFKTKALIL
KEQELQQDQE FATSAEATSN PESSGVSPLT SHISAADSFA RAAYWFALAA PRHMEALHEH
GVALIHGYQG VPEVAKGEQL IATAAEAGVV NAMALLGYFY LVGSESFQPD SKLAQQYLQR
AAEGEQTEAM ANLGVLHYQQ KNLTQAYHFI SKAAQAGYPH AQYHLALMLA NGDGCTRDMI
ASEYWMAEAA EQGQLDAMLT RAQHMLNDDN AFGSDLTQAE DYLRQVIKYG HSVPAMIELS
MALADGMLGR IDVVGAAALL KLARQHANKK EAEIIEPLWR SLALQIENVL KVTQDPAEIH
SLNRAQTLLV I
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