Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4251 |
Symbol | |
ID | 5756082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 5028576 |
End bp | 5029388 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641290607 |
Product | integrase catalytic region |
Protein accession | YP_001556669 |
Protein GI | 160877353 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00271543 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCATCGAA GTAGCTATAA GTATTGGCTA AAAAGAAAAG AACATATTGA TGCAGACTTT ACTATTTTAT GCAGTGAAGT GAAGGCTGCA CATCGTATTA GTCATGGCTC TGCCGGTGCG CGAACGATAG CGCAATTAGT GACTAACAAA GGGATTGGTC TCAGTCGTTA TCGAGCCCGT AATCTAATGA AAAAACTTGG GTTATTAAGC TGTCAACAGC CTAAGCATTC TTATAGGAAA GCGACACAAG AGCATGTTGC AATCCCCAAT ACGCTTAATC GACAGTTTGC AGTAACTCAA CCTGATCAAG TGTGGTGTGG CGACGTGACG TATGTTTGGG TCGGTAATCG CTGGGCCTAT CTAGCCGTTG TTTTAGACTT ATTTTCCCGC AAACCTGTTG GATGGGCTTT GTCATTATCA CCAGATAGTG CGCTGACCTG TAAAGCTTTG AAAATGGCAT TTGAGTTAAG GGGTAAGCCT GAGAATGTGA TATATCACAG CGATCAAGGT TCGCATTACA CAAGCTTGAA ATTCAGACAA TTAATATGGC GTCTTCAGAT TGAGCAAAGT ATGAGTCGCC GCGGGAATTG TTGGGATAAC GCACCAATGG AGCGTTTCTT TAGAAGTTTG AAATCTGAGT GGATACCCGC CAGTGGTTAT GGGAATTTTA CAGAAGCAGA TAAAGAGATC ACAAATTACA TCACTGGATA TTACAGTGAG ACCAGACCCC ATCAATATAA TGGTGGGTTA ACGCCAAATG AGTCAGAACG TTTATATTGG AATGACTCTA AAACCGTGGC CAATTTTACT TGA
|
Protein sequence | MHRSSYKYWL KRKEHIDADF TILCSEVKAA HRISHGSAGA RTIAQLVTNK GIGLSRYRAR NLMKKLGLLS CQQPKHSYRK ATQEHVAIPN TLNRQFAVTQ PDQVWCGDVT YVWVGNRWAY LAVVLDLFSR KPVGWALSLS PDSALTCKAL KMAFELRGKP ENVIYHSDQG SHYTSLKFRQ LIWRLQIEQS MSRRGNCWDN APMERFFRSL KSEWIPASGY GNFTEADKEI TNYITGYYSE TRPHQYNGGL TPNESERLYW NDSKTVANFT
|
| |