| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4143 |
|---|
| Symbol | |
|---|
| ID | 5755970 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4906151 |
|---|
| End bp | 4907374 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641290496 |
|---|
| Product | putative AcnD-accessory protein PrpF |
|---|
| Protein accession | YP_001556562 |
|---|
| Protein GI | 160877246 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCTT CAACAACCCA CGCGCCACAA ATCAAAGTTG CTGCGACCTA TATGCGCGGC
GGCACCAGTA AAGGCGTGTT TTTCCGTCTG CAGGATTTAC CTAAAGCCGC ACAAGTTGCT
GGCCCTGCCC GTGATGCGCT ACTGCTGCGA GTGATTGGCA GCCCAGACGC TTACGGCAAA
CAAATCGATG GCATGGGCGG CGCCACCTCA AGCACCAGTA AAACCGTGAT CCTCTCCCCT
AGCACCCAAA CCGATCACGA TGTCGATTAC CTGTTCGGCC AAGTGGCCAT CGATAAACCC
TTTGTCGATT GGAGTGGTAA CTGCGGCAAC TTAACCGCCG CCGTCGGCGC CTTTGCCATC
AGCAATGGCT TAATTGATAC GGCCCGCATT CCACAAAATG GCATCTGCAC TGTGCGTATT
TGGCAAGCCA ACATAGGCAA AACCATTATC GCCCATGTGC CAATCACTAA AGGTGAAGTG
CAAGAAACAG GGGATTTTGA GCTCGATGGT GTGACCTTTC CCGCCGCCGA AGTGCAAATC
GAATTTATGA ATCCGGCTGC TGACGAAGAT GCCCATTCTA ACGGAGGGGG TAGCAGCATG
TTCCCGACGG GCAATGTTGT TGATGTGCTA GAAGTGCCGG GTATTGGCAG CTTTAAGGCC
ACTATGATTA ACGCTGGCAT TCCCACCATT TTTATCAATG CTGAGGACTT AGGCTACACA
GGCACTGAGC TGCAGGATGA TATTAACAGC GACACGGCGG CACTGGCTAA ATTTGAAACA
ATTCGCGCCT ATGGCGCTGT GCGTATGGGC TTGATTTCGC ATATAGATGA AGCGATTACG
CGCCAACATA CGCCCAAGGT CGCCTTTGTG GCTAAACCCA AAGCCTATGT GTCATCGAGC
GGCAAGCCCG TCAATACCGA TGATATCGAC TTGCTCGTGC GCGCGCTGTC GATGGGTAAA
CTGCACCACG CCATGATGGG CACAGCTGCA GTGGCAATTG GCACAGCAGC AGCGATCCCC
GGCACCTTAG TTAACTTAGC CGCTAGCGGC GACACTAAGG ACAAAATAGA TGCGGTGCGT
TTTGGTCATC CCTCTGGCAC GCTGCGTGTT GGGGCTGAGG CGTCAATGGT TGACGGCGAA
TGGACAGTCG TTAAAGCCAT TATGAGCCGC AGCGCCCGCG TGCTAATGGA AGGTTTTGTG
CGAGTACCGA GCGAGTGTTT CTGA
|
|---|
| Protein sequence | MNASTTHAPQ IKVAATYMRG GTSKGVFFRL QDLPKAAQVA GPARDALLLR VIGSPDAYGK
QIDGMGGATS STSKTVILSP STQTDHDVDY LFGQVAIDKP FVDWSGNCGN LTAAVGAFAI
SNGLIDTARI PQNGICTVRI WQANIGKTII AHVPITKGEV QETGDFELDG VTFPAAEVQI
EFMNPAADED AHSNGGGSSM FPTGNVVDVL EVPGIGSFKA TMINAGIPTI FINAEDLGYT
GTELQDDINS DTAALAKFET IRAYGAVRMG LISHIDEAIT RQHTPKVAFV AKPKAYVSSS
GKPVNTDDID LLVRALSMGK LHHAMMGTAA VAIGTAAAIP GTLVNLAASG DTKDKIDAVR
FGHPSGTLRV GAEASMVDGE WTVVKAIMSR SARVLMEGFV RVPSECF
|
|---|
| |