Gene Sbal195_4133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4133 
Symbol 
ID5755960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4892473 
End bp4894290 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content47% 
IMG OID641290486 
Productdiguanylate cyclase 
Protein accessionYP_001556552 
Protein GI160877236 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC GAAATCATTC TATTAGTCAT AAGATGACGC TGACCATTAT CGGGGTGAGC 
TCATTTTTTG CTGTGTTAAC TATGCTGGTG CAGCTGATTT GGAACTATCA GGATAGTATC
GACAATGCCA CGTCGGATAT CCGCGAATAT TCAGAATCTA TTCTGCCGAG CGTGGCGAAG
TCGCTGTGGG ACGTTGACCG CAGCCTGCTA TCTGATTTGC TCTCTGGTTT AGGGATGATG
CCGTTAGTGT CGAGTGTGCA TTTAGACAGT ATCGACGGCG TCACTATGCA GCTGGGTAAA
CCGCTGTTAA CCGACGACGA GTCGCAAACC CTGTTTCATT ATCCTGTGAC TTATCAAGAT
CAGCTGATCG CAACTTTAAC CGTAGGCTTA GATACTAACC AGCTTTACTA CGAGCTGTGG
CGACAGTTGA TTTTTATTGT GCTCGGCAAT GGCTTAAAGA CCCTGCTGAT GATCTATTTG
ATCTTGACCT TAGTGCGACT CATGGTGACG GATAGATTGT CGGCATTGGA AGATTTTACT
AATAAAATCA ATCTAAAATC GCTAAAAAAG TTATCTGTGC CCGAGACGGT GACCGCCAGT
CCTGACGAGA TTGCCCATGT GGCATTGTCG CTTAAGGCCA TGTATCAAAG GATACGCAAC
GACCTCGCTA TCAATAAACG CCATCAACGT GCGTTACAGC AACAGCAGCA TTTATTGTCG
GACTTAGTGA AAGAGCGGAC CAAAGAACTG GACTGGCAGT CGCAGTCGAA TCAATTACTG
GCAGAGATTT CGCTGCAATT TTTGAGTATC GACACCTGCA ATGTAGACAA AACCTTAACT
GAGGTGTGCC ACAAAATAGG TCAGTTGTTT GATGTTGAAA GGGTGAGTAT TCTCGAATTT
CATCAACAGC ATGCCTATTA CCGCAGTTTT TGGACCAGCG AGTTACATGC TAACAAGGTC
CAAGGGATTT CGGTGGACAA CATTACTCAG CTTGCTAAAA AATTCGAAAC AGAATCGACT
TTAGTGATTG AGGATCTTGA GGCGTTAAAG GACTTTTCAC CGCAGGAATA TGAAGTGATG
AAATCCGTGG GCATTTGCTC TATTGCTGCC TTTGCGATTA AAAATGCCGG AGAGTTATTG
GGATTACTCT CGCTGTCGAC GGTGTCGCGG CCCTTGAATT GGAACGCCCA GAAAAAGAAT
ATGCTGACTC AGTTTGCCTC CGCATTGAAC GAGTTACTGT TGCGCGAGCA GAAAGAGCGG
CAGATGATAG TGCTGCAACA AGCGCTGGTT TCTGCCAATA CTCAATTGAA AGAAATGGCC
GAAACCGATG AGTTAACGGG CCTAGCCAAT AGACGCCCCT TTACCGAAAG ATTAGAAACT
GTACTACAGG CGGATATCCC TGCGGGACTG TTTATGTTGG ACGTCGATTA TTTCAAATCC
TACAACGACA CTTACGGTCA TCTCGAAGGC GATGTAGTGC TTAAGCGTGT GGCAGATGCC
TTAGCGCAGT GCGATATCCT GCCGCACAAT GCTTTGTTGG CGCGCATCGG TGGCGAAGAG
TTTGCCTTAG TTGTTGAGCA TGTCACGCCT GCACAGTTAA CGGCCATTGC CACGCAGTTG
TGTTATCTCG TCGAGCAACT CAATATACCC CATCAAGCAT CGCCGTTGGC TGTGGTGACC
ATCAGTATTG GCAGCGTGTT TTTGCCATTA GATAAGGTCT CGGGGCTTAA GATGGCCGAC
GTGTTACGCC GCGCCGATGT TTGCCTTTAT CGCGCTAAGG ATAAAGGTCG CAATAGAGTC
GAGGTTGAAG TGATTTAA
 
Protein sequence
MKHRNHSISH KMTLTIIGVS SFFAVLTMLV QLIWNYQDSI DNATSDIREY SESILPSVAK 
SLWDVDRSLL SDLLSGLGMM PLVSSVHLDS IDGVTMQLGK PLLTDDESQT LFHYPVTYQD
QLIATLTVGL DTNQLYYELW RQLIFIVLGN GLKTLLMIYL ILTLVRLMVT DRLSALEDFT
NKINLKSLKK LSVPETVTAS PDEIAHVALS LKAMYQRIRN DLAINKRHQR ALQQQQHLLS
DLVKERTKEL DWQSQSNQLL AEISLQFLSI DTCNVDKTLT EVCHKIGQLF DVERVSILEF
HQQHAYYRSF WTSELHANKV QGISVDNITQ LAKKFETEST LVIEDLEALK DFSPQEYEVM
KSVGICSIAA FAIKNAGELL GLLSLSTVSR PLNWNAQKKN MLTQFASALN ELLLREQKER
QMIVLQQALV SANTQLKEMA ETDELTGLAN RRPFTERLET VLQADIPAGL FMLDVDYFKS
YNDTYGHLEG DVVLKRVADA LAQCDILPHN ALLARIGGEE FALVVEHVTP AQLTAIATQL
CYLVEQLNIP HQASPLAVVT ISIGSVFLPL DKVSGLKMAD VLRRADVCLY RAKDKGRNRV
EVEVI