Gene Sbal195_4131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4131 
Symbol 
ID5755958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4890249 
End bp4891565 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content47% 
IMG OID641290485 
Producthypothetical protein 
Protein accessionYP_001556551 
Protein GI160877235 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCT TTGATAACGT GATGATTATA TTGTGCCTAA TCGGCGCGAG TTGTTTCTTC 
TCTATGTCAG AAATTGCACT TGCCGCTTCA CGTAAAATCC GTTTACGTCA GTTGGCCGAT
GAGGGCGATG CCCGTGCAGA AAAAGTGCTG CAGTTACAAG CCGTTCCCGG CAGTTTTTTT
ACTGTGGTAC AAATCGGTCT TAATGCCGTT GCCATCATGG GCGGTATCGT CGGTGAGTCG
GCATTTCGGC CTTATTTCTA TGAATTACTG TCGCCTTTGC TGACCGATCC TTGGTTGAGC
CAAATGAGCT TTGTTTTATC CTTTATTGTC GTCACCAGTG CCTTTATTCT GGTGGCCGAT
TTGATGCCAA AACGCATTGC CATGGCTATG CCAGAGCCCG TCGCGTTGGC TGTTGTTGGG
CCTATGTCTT TCTGTATCGT GCTACTGCGT CCATTAGTGT GGTTTTTCAA TGGCATGGCG
AGCGGCATCT TTAAACTGCT GCAAATCCCA ACCGTGCGTA ACGATGCCAT CACCTCTGAC
GACATTTATG CCGTGATGAA CGCGGGCGCC GAAGCAGGGG TATTAGATCG CGGTGATCAA
CAGATGATGG AAAATGTGTT TGAAATGCAA ACCGTTTCTG TGACTTCGGC CATGACGGCC
CGAGAAAGCT TAGTGTACTT TTTACTGCAA GATAGCGAAG AAGATATCAA GCGTAAGATT
TCTGAAGATC CCCACACTAA GTTCCTCGTC TGCGATGGTC AGTTAGATAT GATCAAAGGT
TTTGTGGATG CAAAAGAGCT GCTGATCCGA GTGATTAACG GTGAGAATAT TACCTTAAAA
GGCAGTAACT TAGTCCACAC TTCGCTGATC ATTCCCGATA CTTTGAGCCT GTCAGAGGCA
ATGGAATACT TTAAGAATAG CCGCGCCGAT TTTGCCGTGG TCATGAACGA ATATGCCTTA
GTGGTGGGGA TTGTTACGAC CAACGATTTG CAGCGCGCCG TGATGGGTGC TTGGTCATTG
CACGAGAGCG AAGAGCAGAT CATCGCCCGT GATAGCAACT CTTGGTTAGT CGATGGTGTA
ACGCCGATTA CTGATGTGAT GCGCGCCTTC GGCATCGAAG AATTCCCGCA TAATCAGAAC
TACGAAACCA TTGCCGGTTT TATGATGTAT ATGCTGCGTA AAATCCCTAA GCGTACCGAT
TTCGTGAACT ATGCGGGCTA TAAATTTGAG GTGGTCGATA TCGATTCTTA CAAGGTCGAT
CAGCTATTGG TTACCCGCAT CGATCCTATC GATAAGCTCA ACTCGCCAGA TGTGTAA
 
Protein sequence
MSLFDNVMII LCLIGASCFF SMSEIALAAS RKIRLRQLAD EGDARAEKVL QLQAVPGSFF 
TVVQIGLNAV AIMGGIVGES AFRPYFYELL SPLLTDPWLS QMSFVLSFIV VTSAFILVAD
LMPKRIAMAM PEPVALAVVG PMSFCIVLLR PLVWFFNGMA SGIFKLLQIP TVRNDAITSD
DIYAVMNAGA EAGVLDRGDQ QMMENVFEMQ TVSVTSAMTA RESLVYFLLQ DSEEDIKRKI
SEDPHTKFLV CDGQLDMIKG FVDAKELLIR VINGENITLK GSNLVHTSLI IPDTLSLSEA
MEYFKNSRAD FAVVMNEYAL VVGIVTTNDL QRAVMGAWSL HESEEQIIAR DSNSWLVDGV
TPITDVMRAF GIEEFPHNQN YETIAGFMMY MLRKIPKRTD FVNYAGYKFE VVDIDSYKVD
QLLVTRIDPI DKLNSPDV