| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4125 |
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| Symbol | |
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| ID | 5755952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4881171 |
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| End bp | 4882766 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641290479 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001556545 |
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| Protein GI | 160877229 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form
[TIGR01127] threonine dehydratase, medium form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCAC TTGCATCGCA AGCTCGGACG GATTTAGCAC ATTTTCAGTT GGCACAAAGC
TATCTGCAAA AAATCCTGTT GTCATCTGTG TATGACATAG CGAAAGTGAC GCCGCTTTCA
AGCATGAACA AGTTATCGGC GCGTTTAGGT TGTCAGGTAT TTTTGAAGCG CGAAGATATG
CAGCCAGTGC ATTCCTTCAA GTTACGCGGT GCCTATAACC GTATCGCCCA GCTGACGAAA
GAAGAATGTC AGCGCGGTGT GGTGTGTGCT TCGGCAGGCA ATCATGCTCA GGGTGTGGCG
ATGTCGGCGG CGAGTCGCGG CGTGGATGCT GTAATTGTGA TGCCTGAGAC GACGCCCGAT
ATTAAAGTCG ATGCGGTGCG CCGTTTAGGT GGCAACGTGG TATTGCACGG CCAAGCCTTC
GATCAAGCCA ATGGCTATGC GATGGCGATG GCTAAAGAAG AGGGCCGAGT CTATATCGCG
CCCTTTGATG ATGAAGCAGT GATCGCAGGC CAAGGCACTA TCGCCCAAGA GATGTTGCAG
CAGCAGCGCG ATCTCGAAGT GGTATTTGTG CCCGTGGGCG GCGGCGGTTT AATCGCGGGT
ATCGCAGCCT ATTACAAGGC GGTGATGCCG CAGGTAAAAA TTGTCGGCGT CGAGCCTGAA
GATGCCGCCT GTTTAAAGGC GGCGATGGAA GCGGGCGAGC CGGTGACACT GGCGCAAGTT
GGTTTATTTG CCGACGGCGT GGCGGTAAAG CGTATTGGCA CTGAGCCATT TCGAGTCGCC
AAACTGTATG TCGATGAAGT GGTCACTGTG ACCTCGGATG AAATCTGCGC TGCGGTGAAA
GATATCTTCG AAGATACCCG TGCGATTGCT GAACCCGCTG GGGCTTTGTC CTTGGCTGGG
CTTAAAAAAT ATGTCAGCGC CAATGCCAGT GGCAACAGCG GTAAAGGCGA GAAAGTCGCC
GCGATTTTGA GTGGCGCGAA TGTGAATTTC CACAGCCTGC GTTATGTGTC TGAACGCTGC
GAACTCGGTG AGCAAAAAGA AGCAGTACTG GCAGTGAAAG TCCCTGAACG TCCGGGAAGT
TTCTTAAAAT TCTGTGAGTT ACTCGATAAG CGGGTGATGA CAGAGTTCAA CTATCGTTTC
AGCAGTCGCG ATCTGGCCGT GGTGTTTGCT GGCATTCGCC TAAGCAGAGG CCAAGGCGAG
CTTGAACAAA TCATCGCTAC CTTAGAGGCT AACGATTTTG AAGTGCAGGA TTTATCCGGC
GATGAAACCG CGAAATTGCA TGTGCGCTAT ATGGTCGGCG GCCATCCACC TGAGCCTTTA
GAAGAGCGTT TGTTTAGCTT CGAATTCCCC GAACATCCCG GTGCGCTGCT GAAGTTTTTA
ACCACCCTGC AGAGCAAATG GAACATTAGT CTGTTCCATT ATCGCAACCA CGGCGCGGCC
TTTGGCCGAG TGCTGGCGGG ATTTGAAGTA CCCGCGAGCG ATGCTTTGCC GTTCCAACAG
TTTTTAACTG AGTTGGGTTT TGTCTATCAA GAGGAAACCC AAAGTCCTGC CTATCAGCTG
TTTTTAAATG CGGGTAACGG CAGCAAAGTC TTATAG
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| Protein sequence | MLPLASQART DLAHFQLAQS YLQKILLSSV YDIAKVTPLS SMNKLSARLG CQVFLKREDM
QPVHSFKLRG AYNRIAQLTK EECQRGVVCA SAGNHAQGVA MSAASRGVDA VIVMPETTPD
IKVDAVRRLG GNVVLHGQAF DQANGYAMAM AKEEGRVYIA PFDDEAVIAG QGTIAQEMLQ
QQRDLEVVFV PVGGGGLIAG IAAYYKAVMP QVKIVGVEPE DAACLKAAME AGEPVTLAQV
GLFADGVAVK RIGTEPFRVA KLYVDEVVTV TSDEICAAVK DIFEDTRAIA EPAGALSLAG
LKKYVSANAS GNSGKGEKVA AILSGANVNF HSLRYVSERC ELGEQKEAVL AVKVPERPGS
FLKFCELLDK RVMTEFNYRF SSRDLAVVFA GIRLSRGQGE LEQIIATLEA NDFEVQDLSG
DETAKLHVRY MVGGHPPEPL EERLFSFEFP EHPGALLKFL TTLQSKWNIS LFHYRNHGAA
FGRVLAGFEV PASDALPFQQ FLTELGFVYQ EETQSPAYQL FLNAGNGSKV L
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