| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4106 |
|---|
| Symbol | |
|---|
| ID | 5755933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4864301 |
|---|
| End bp | 4866358 |
|---|
| Gene Length | 2058 bp |
|---|
| Protein Length | 685 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641290460 |
|---|
| Product | ATP-dependent DNA helicase Rep |
|---|
| Protein accession | YP_001556526 |
|---|
| Protein GI | 160877210 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | [TIGR01074] ATP-dependent DNA helicase Rep |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCAT CCCTTTCTGT CGACTTGTTT GGATATTGCG CAAAGATGAA ACTCAATCCC
GCCCAAAACG ATGCTGTTCA TTATGTTTCA GGCCCTTGCC TAGTATTGGC GGGTGCGGGC
AGTGGTAAGA CGCGCGTAAT TATCAATAAA ATCGGTTACT TGGTCGAAAA GTGCGGCTAT
AAGGCACGCA ATATTGCGGC GGTGACCTTC ACCAACAAGG CTGCCCGTGA GATGAAAGAG
CGGGTCGCTC AGTCCATGGG ACGCAAAGAG GCCAGAGGTC TGTGGATTTC AACCTTCCAC
ACCTTAGGGC TTGAAATCAT TAAGCGTGAG CATAAGGTCT TAGGCTTAAA GCCGGGATTT
TCGCTGTTTG ATGATCAAGA TACCTTGGCA CTGCTCAAAG AGTTAACCCA AGACGAGTTA
GACGAAGATA AAGATTTACT CAAAGCGCTC GCCAGTACGA TTTCAAACTG GAAGGGCGGT
TTAATTATTC CCGAGCATGC ACGCAAGATC GCTAAAGATG AGCAGCAGCA TTTATTTGCC
ATGTTGTATC AGCGTTATGC CCAGCACATG AAAGCCTATA ACGCCTTAGA TTTTGACGAT
TTAATCCTGA TGCCAACCTT ATTGTTGCGG CATCATGAAG AAGTGCGTAC CCGCTGGCAA
ACCAAGATCC AATACTTGCT GGTGGATGAA TATCAAGATA CCAATACCAG CCAATATGAG
ATGGTAAAGC TGTTAGTGGG TGATCGGGCG CGCTTTACCG TAGTGGGTGA CGACGATCAG
TCGATCTATT CATGGCGCGG TGCTAAACCA CAAAACTTAG TGTTATTGGG TACGGATTTT
CCGCAGCTTA AGTTAATTAA GCTCGAGCAG AATTACCGTT CTAGTCAACG GATCCTGCGG
GCTGCTAACA TTCTTATCGC GAACAATCCC CATGTTTACG ATAAAGCGCT CTTTAGTGAG
CTTGCCTATG GGGAGCCGCT GCGGGTGCTA TTTGCCGCCA ACGAGGAGCA AGAGGCTGAA
CGTGTGGTCG CGGAAATAGT GCGACACAAG TTTGTTGGCC GTACTCAGTT TGGCGACTAT
GCGATTCTGT ATCGCGGCAA CCATCAATCG CGGTTACTCG AGCGCGCGCT GATGACGAAC
CGCATTCCTT ACAAATTGAG TGGTGGCACG TCATTCTTCG CCCGTGCTGA AATCAAAGAC
ATCATGGGCT ATCTAAAGCT GGTGGTGAAT CCCGATGATG ATAATGCTTT CCTGCGCATA
GTTAACTTGC CTAAACGTGG CATAGGCCCA TCGACTTTAG AGCGCTTAGG TAATTTCGCT
AATGAGAAGC ATATTTCTAT GTTTGCGGCG ATTTTTGAGC CTGAACTCAA TCATCATTTA
CCGCCGGCGG CTATGTCATC CCTGTATCAA TTCGGTCGTT TCATTGTCGA GACAGGGGAT
CATGCAGAGC GTGGTGAACC TGTCGAGGCT GTGAAGCATT TGATCCGTAA GATCAATTAT
GAAGATTATC TATACGAAAC CAGCACGAGT GCCAAAGCCG CTGAAATGCG GATGAAGAAT
ATCTCAGAGC TATACCGTTG GGTAACTGAG ATGCTCGCGG GTGATGAATT AGATGAGCCA
ATGACCTTGC CTGAGGTTGT GACTCGACTG ACGCTCAGAG ACATGATGGA GCGCAATAGC
GAGGACGAAG GCGGCGATCA AGTGCAGTTG ATGACCTTGC ATGCTTCTAA GGGCTTAGAG
TTCCCGTTTG TGTTTATGGT GGGAGTGGAG GAGCGGATCT TACCCCATCA GACCAGTATA
GATGAAGACA ATGTCGATGA AGAGCGCCGC TTAGCCTACG TGGGCATCAC TCGGGCTCAA
CGTGAACTGT GGTTTACCCT CTGTCGTGAA AGACGTCAAT TTGGTGAAAC CATGCGTTGT
GAGCCGAGCC GTTTCTTGCT TGAGTTACCT CAAGATGATG TGGTGTGGGA AAATCGTAAA
CCACAGCAGA CAGAACAGGA GCGGATGCAG ACTGGGCGAG CCAACATTTC TAGCTTAAGG
GATATGTTTA AAAAATAA
|
|---|
| Protein sequence | MIPSLSVDLF GYCAKMKLNP AQNDAVHYVS GPCLVLAGAG SGKTRVIINK IGYLVEKCGY
KARNIAAVTF TNKAAREMKE RVAQSMGRKE ARGLWISTFH TLGLEIIKRE HKVLGLKPGF
SLFDDQDTLA LLKELTQDEL DEDKDLLKAL ASTISNWKGG LIIPEHARKI AKDEQQHLFA
MLYQRYAQHM KAYNALDFDD LILMPTLLLR HHEEVRTRWQ TKIQYLLVDE YQDTNTSQYE
MVKLLVGDRA RFTVVGDDDQ SIYSWRGAKP QNLVLLGTDF PQLKLIKLEQ NYRSSQRILR
AANILIANNP HVYDKALFSE LAYGEPLRVL FAANEEQEAE RVVAEIVRHK FVGRTQFGDY
AILYRGNHQS RLLERALMTN RIPYKLSGGT SFFARAEIKD IMGYLKLVVN PDDDNAFLRI
VNLPKRGIGP STLERLGNFA NEKHISMFAA IFEPELNHHL PPAAMSSLYQ FGRFIVETGD
HAERGEPVEA VKHLIRKINY EDYLYETSTS AKAAEMRMKN ISELYRWVTE MLAGDELDEP
MTLPEVVTRL TLRDMMERNS EDEGGDQVQL MTLHASKGLE FPFVFMVGVE ERILPHQTSI
DEDNVDEERR LAYVGITRAQ RELWFTLCRE RRQFGETMRC EPSRFLLELP QDDVVWENRK
PQQTEQERMQ TGRANISSLR DMFKK
|
|---|
| |