Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_4104 |
Symbol | |
ID | 5755927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4858375 |
End bp | 4860294 |
Gene Length | 1920 bp |
Protein Length | 639 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641290454 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001556524 |
Protein GI | 160877208 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.950897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGT TTAGACAGAT TTATTCGCTG CTTTTTAGCC TATTTTTGCT CGTAGTTGCA AGCCTTGGCT ATGTGCAATT TACTGAGACT CAAAGCTTTT TGACCAAGCA AATGGAGTCA GATCTAAACA ATGCCAGCAC TTCACTTGGT CTAATGCTTA CTCCAGCACT TCAAGCTGGC GATACCGCAG CGGCAGAAAC CTTAGTGAAT GTCATCTTTG AAGGTGGCTA TTATCAAAAT GTAAAGCTGA CATGGATGGT GGATGGTAAG CAACAAGAGT GGAATAACCC TTTAAGAATT GAAGATGTAC CTCAATGGTT TATCAATTTA AATCTATTTA AAACCATCAA AAAACAAAGC ACTATTACTT CTGGCTGGTT GCAACTCGCG CAACTTGAGA TCACCGCTCA TCCTGGGTTT GGTTACCATG AGCTGTGGCG AATCATGTCC AATACGATCA TTGCCTTCTC TATACTTTTC CTCGTCGCCA TTTTTACCGC AAGAATTGGT TTAACGTGGA TATTGAAACC TTTACACACT TTGTCAGAAC ACGCGAAAAG TATTGCGGCA CGCCAATTTG GCCCAGACAT GGCATTACCT AAGACCACTG AATTGAAAGA CTTAGTGACC GCATTTAACA GTATGTCGGC GCAGTTAAAG CAAGTATTCC ATTCCCTCGA CGAAGAAGTC GGCGCGTTAC GTAAGAAGAA TCTTGTCGAT CCTGCGTCAG GCCTGCCTAA CCGCCAATAT GTGGTAAGCC GTTTAAATGG TTGGTTGAGT GAACCTAGCA GCGGCGCGTT ATTCCTGGCT AAACTCGACT GGCTCGAAGA AGTGCACAGC AAATATGGCT ACCAAGTTCG AGATGAAACC ATACGGATCT TGGCAGAAAA GTTTCAGCTG CAGTTAAACG AAATAACACC GTCTGTTATA GGCCGCATTG CCGCCTATGA ATTTGCATTT TTAGTGACTG ATGTTGAACA CGATCAAATA AGCAAATATT TACAAACACT TATCCGCACC ATCAACCAAG AAATGTCGAA GGCGGGCTGT AAGCCTAATG AAGACTTTGC GATTGGTATT GCGGAGCGTA TTGGGCAAAT GAATGTGTCG GATATTTTGG CCCAAGCCGA CAACGCCCTT CAAAAAGCGT TACAAGAAAA TAAAACATTC CATTGGTTTG AAACCACAGA GCAGCAACTA TTCACCCGTG AACAGTGGCG GGATAACCTT AGCCATGCCA TCAGTAATAA GAAGTTTAAG TTTAGATGGC AGCCTATCCA GTTTTGCGAT GGGGATGGTA TAGCGCAGCG GGAATTATAT TGCCAATTAG AGCTCGGCGA TCAACTCGCC CATGCAGGGC AATTTATGCC TTATATCGAG CTCTTATCTC TCGGTGCCTT GCTCGATAAA TGCTTAATTG AAACCGTCTA CGAGCAGAAA CTGCTAGAGC GTAGCTATGA ACCGCTCGCG ATTAATTTAA CCCACCAAAG TATTAACGAT CCTCACTTCC ATGAGTGGCT CAATCACTTC TTACGTAATG CCGCATTTAT TGAGCGGATC TGCTTCGAAA TCCCTGAGGC AGGCGTTTAT AGCGATCTTA AGTCGTGTCA GCACTTATGT AACATTATTC GAGATAATGG CGCTAAGTTC GGCATTGATC ACTTTGGCCG TCAGTTTGGC TCTATGTCTT ATCTACAGGA ATTAAGACCG AGTTATGTGA AACTCGATCA ATCCTTCGCC TACTATGATG AGACACACCA TAATAGTGAG CTCTGCCGCG CGCTAATCAA CGTAGCGAAA GGATTAGATA TTCAAGTCAT AGTGACGGGT ATTCAAGAAA AAGCTCAGCT AGAGCGCTTT AACGAGCTTA GAACTGATGC CTATCAGGGC TTTATCGCCC CTCCGGTGAG TCTTGATTAA
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Protein sequence | MTLFRQIYSL LFSLFLLVVA SLGYVQFTET QSFLTKQMES DLNNASTSLG LMLTPALQAG DTAAAETLVN VIFEGGYYQN VKLTWMVDGK QQEWNNPLRI EDVPQWFINL NLFKTIKKQS TITSGWLQLA QLEITAHPGF GYHELWRIMS NTIIAFSILF LVAIFTARIG LTWILKPLHT LSEHAKSIAA RQFGPDMALP KTTELKDLVT AFNSMSAQLK QVFHSLDEEV GALRKKNLVD PASGLPNRQY VVSRLNGWLS EPSSGALFLA KLDWLEEVHS KYGYQVRDET IRILAEKFQL QLNEITPSVI GRIAAYEFAF LVTDVEHDQI SKYLQTLIRT INQEMSKAGC KPNEDFAIGI AERIGQMNVS DILAQADNAL QKALQENKTF HWFETTEQQL FTREQWRDNL SHAISNKKFK FRWQPIQFCD GDGIAQRELY CQLELGDQLA HAGQFMPYIE LLSLGALLDK CLIETVYEQK LLERSYEPLA INLTHQSIND PHFHEWLNHF LRNAAFIERI CFEIPEAGVY SDLKSCQHLC NIIRDNGAKF GIDHFGRQFG SMSYLQELRP SYVKLDQSFA YYDETHHNSE LCRALINVAK GLDIQVIVTG IQEKAQLERF NELRTDAYQG FIAPPVSLD
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