| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4095 |
|---|
| Symbol | |
|---|
| ID | 5755918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4828338 |
|---|
| End bp | 4829078 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641290445 |
|---|
| Product | uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_001556515 |
|---|
| Protein GI | 160877199 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.56612 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT TACTGACGCG CCCCGAGGGG CGCAATCAGT CCATGGTCGA TGCCTTGAAT
GAACGAGGCA TTGCCCACTG GGTCACACCT CTGCTGTGTG TCGAAGCAAC GCCCGCTATC
GCAACGAATA CCCCGCATCC TTTGGCACAC GCCGATATGA TTATCTGCAT CAGCGCCAAT
GCTGTAACTT TTGCAGATAA CGCCTTAACA GCTGCGAATC CACACACCAA AGCTTGGCCT
CCAGCTCAGT ACTTCGCCGT GGGCCATGCG ACTTGGGACG CATTAGACCA ACTCGGTATT
TCTGCCCTCG AAGCCCCAGA TGATTGCCAG CAGACCGAAG GGCTACTCAC ACTCGCGCCG
CTGCAAGAGA TTAAAGGTAA GCAGATTACT ATTATACGTG GTGTCGGTGG CCGCGAAGCC
TTAGCCGAAC AACTGGCTGC GCGCGGTGCA CATTTGCGCT ATTGGGAAGT GTATCAACGA
GCTTGCCCGC CACTCGATGG TCAACAGTTA GCTCTGCAAT GGCAAGCCTT CGGGATAGAC
ACTATTGTGG TGACCAGCGG TGAAGTACTG GATAACCTGA TTAATTTAGT GCCAAAAGAG
TTATTTGCAT GGCTGCGCTC ATGTCATATC ATAGTCCCAA GTAACCGAGT AGAAGCTCAA
GCTCACGCCT TTGGTATAAC CCAAGTCACC AATGCCAATG CCGCCAACAG CAAAGCCGTG
CTAAACGCCC TTAAACTCTA A
|
|---|
| Protein sequence | MKVLLTRPEG RNQSMVDALN ERGIAHWVTP LLCVEATPAI ATNTPHPLAH ADMIICISAN
AVTFADNALT AANPHTKAWP PAQYFAVGHA TWDALDQLGI SALEAPDDCQ QTEGLLTLAP
LQEIKGKQIT IIRGVGGREA LAEQLAARGA HLRYWEVYQR ACPPLDGQQL ALQWQAFGID
TIVVTSGEVL DNLINLVPKE LFAWLRSCHI IVPSNRVEAQ AHAFGITQVT NANAANSKAV
LNALKL
|
|---|
| |