Gene Sbal195_4084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4084 
Symbol 
ID5755907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4818321 
End bp4818824 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID641290434 
Productputative transcriptional regulator 
Protein accessionYP_001556504 
Protein GI160877188 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00450512 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACATTTC AATCATTTGC ACTCGATGAT ATTGCCGATT TACACGAATC GGCCCAAGTA 
GAGTTTAAAC TCGCAGGTGG CCGCGACGGC CAAGGCCAAT TACCCGAAGA TATTTGGGCA
ACTTATAGCT CCTTTGCCAA CACTTTAGGC GGCGAGATCA TCCTAGGGGT GCGCGAAGAA
CGTGGCCATT TCAGCATTCA AGGCATTCCC AATCCGCTTC CTGTTTTACA AGAGTTTTGG
GAGATACTCG ATAATCCTAA CCGCACTAGC CATAATATTT TGGCGATCTC AGATGTGCAG
ATTATTGAAA TTATGAATAA AAAGCTGATT CGCATCCGTG TACCGCTGGC ACCAGAGCAC
CTCAAACCTA TCTATGTCGG CGGCGATCCT TACACTGGGA GTTATTTTAG AGTGGGAGAT
GCCGACATGC ATGCGAGCCG TCGGCAGGTC AATCTACTGT TACGCCGCGC CCATCTTTGC
ATGAAGCAAC TCAAGGCGCG TTAA
 
Protein sequence
MTFQSFALDD IADLHESAQV EFKLAGGRDG QGQLPEDIWA TYSSFANTLG GEIILGVREE 
RGHFSIQGIP NPLPVLQEFW EILDNPNRTS HNILAISDVQ IIEIMNKKLI RIRVPLAPEH
LKPIYVGGDP YTGSYFRVGD ADMHASRRQV NLLLRRAHLC MKQLKAR