| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4061 |
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| Symbol | |
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| ID | 5755884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4794489 |
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| End bp | 4795760 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641290411 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001556481 |
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| Protein GI | 160877165 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.16247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.505472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACGG CAACGACCAC AAGAAAGCCT CGCACCAAGA AAGCCGAGCA AAAAAGCCAA
CCAAAAATCT ATACCTTTGA ATGGAAAGGC CTAAATCGCG ACGGTAAGAA GACTGCAGGT
GAACTCAGAG GCGCAACTGC CGCCGAAATC CGTAGTCAGT TAAAATCCCA AGGAGTTAAC
CCTAAGAGCG TTCGTAAGCA GTCCTCTGCG CTATTTAAGT TAGGTGATCC GAAAATCACC
CCTATGGATA TTGCCATGAT GACCCGCCAA GTTGCGACTA TGCTAGCGGC GGGCGTACCT
TTAGTGACCA CTATTGAGCT ACTCGGCCGT GGTCACGAAA AAGCTAAGAT GAGGGAACTA
TTAGGAAATA TCCTCAGCGA AATTCAATCT GGCATTCCTT TATCTGATGC AATGCGTCCC
CATAGACGCT ACTTCGATGA GCTATATGTT GACCTAGTTG CAGCAGGTGA ACATTCAGGT
TCACTAGACT TGGTCTTCGA TCGCGTGGCT ACTTACAGAG AGAAAACGGA AGCTCTCAAA
TCCAAAATTA AGAAGGCCAT GTTCTATCCG GCTGCTGTTG TCATAGTCGC ACTATTAGTA
ACAACATTAT TACTTCTATT TGTAGTGCCT CAATTCGAAG AGATATTCAA AGGCTTTGGC
GCTGAACTAC CCGCCTTTAC TCAATTAGTA CTACACATTT CCCGCGGCTT ACAATCCTCT
TGGTATATCT TCTTAGCAGC TATCGTCGGC GGAGTATTTT TGTTCGTTCG AGCCCACAGA
AACTCACAAA TTGTGCGAGA TAGAGTCGAT GAAGCTGTGC TTAAAATCCC CGCTATTGGG
CCTATATTAC ATAAAGGTGC CATGGCACGA TTCGCCCGCA CTTTAGCAAC TACTTTCGCC
GCGGGCGTGC CGTTAATTGA TGGTCTAGAG TCTGCCGCTG GCGCATCGGG TAATGCGGTA
TACCGCAAAG CCATTTTAAA AATCCGTCAA GAAGTGATGG CAGGGATGCA GATGAATGTG
GCTATGCAAA CCACAGGGCT TTTCCCCGAC ATGTTAGTGC AAATGGTGAT GATAGGCGAA
GAATCCGGTT CACTAGATAA CATGCTCAAT AAAGTATCAA CCATCTACGA AATGCAAGTA
GATGATGCGG TTGATGGCTT ATCAAGCCTG ATAGAACCGA TTATGATGGT GGTCATCGGT
ACTGTAGTTG GTGGTCTAAT TGTTGCTATG TACTTGCCTA TCTTCCAAAT GGGTAAAATT
GTTAGCGGCT AG
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| Protein sequence | MATATTTRKP RTKKAEQKSQ PKIYTFEWKG LNRDGKKTAG ELRGATAAEI RSQLKSQGVN
PKSVRKQSSA LFKLGDPKIT PMDIAMMTRQ VATMLAAGVP LVTTIELLGR GHEKAKMREL
LGNILSEIQS GIPLSDAMRP HRRYFDELYV DLVAAGEHSG SLDLVFDRVA TYREKTEALK
SKIKKAMFYP AAVVIVALLV TTLLLLFVVP QFEEIFKGFG AELPAFTQLV LHISRGLQSS
WYIFLAAIVG GVFLFVRAHR NSQIVRDRVD EAVLKIPAIG PILHKGAMAR FARTLATTFA
AGVPLIDGLE SAAGASGNAV YRKAILKIRQ EVMAGMQMNV AMQTTGLFPD MLVQMVMIGE
ESGSLDNMLN KVSTIYEMQV DDAVDGLSSL IEPIMMVVIG TVVGGLIVAM YLPIFQMGKI
VSG
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