| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4060 |
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| Symbol | |
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| ID | 5755883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4792628 |
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| End bp | 4794340 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290410 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_001556480 |
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| Protein GI | 160877164 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0244852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.314215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTACTA CAGGCTTGCA TTTAGGTTTA TCGACCCTTT TTATCCGCAA AGGTCTGCTA
AATGAAGAGC AGATGGCTAA CGCCATCACT AAATCCCGTC AAAACAAACA CGCCCTTGTA
AGCACTTTAG TTCAAAGTCA GCTGGTCTCT GCCCGTGCAA TAGCCGAGCT TTGCTACGAA
GAATACGGCA CACCATTACT CGATCTTAAT GAGTTTGATC TTGCATCAAT TCCTGAAGAT
TTCCTCAATA AGAAACTCAT TGAGAAACAC CGTTGTTTAC CCTTATTTAA ACGCGGGAAT
CGCCTCTATA TCGGCACATC CGACCCGACC AACATTGCAG CCCTCGAAGA CTTTCAATTT
AGTGCAGGGC TGCATGCCGA AGCCATTCTG GTTGAAGAGG ATAAACTTGC TAAGGCGCTG
GAAAAAATTC TCGAAGAAGA TATCAGCGGT CTCGATTTAG GCGGCATGGA CGAAGCTGCG
CTGGCAGCGA TAGAAATTAC TGATACCGAC AGACGTAGCG AAGAGTCTAC TGGTGAGAGT
AGTGACGATG CGCCTATTGT TATCTATATC AATAAAATTT TAACCGATGC CATCCGCAAA
GGTGCGTCAG ATTTACACTT TGAACCCTAT GAGAAACGCT ACCGCATACG GTTTCGCATT
GACGGTATTC TGCACGAAGT CTCTGAACCG CCGATTAGCC TCGCTGGTCG TTTATCGGCA
CGACTAAAGG TAATGTCGAA ACTCGATATC GCCGAACGGC GCGTGCCGCA GGATGGTCGA
ATTAAGATGA AGCTTTCCCG CACTAAATCT ATCGACTTTC GGGTAAGTAC CTTGCCGACG
CTCTGGGGTG AAAAGATTGT AATGCGGATT TTGGACTCAT CCTCCGCACA ATTGGGCATT
GAAAAGCTCG GTTACGAACC CGACCAAGAA AAGCTCTACC TTGAGATGCT AGCAAAGCCC
CAAGGGATGA TTTTAGTGAC CGGCCCTACG GGCTCAGGTA AAACCGTCTC CCTTTACACT
GGGTTAAATA TTCTCAATAC AGAAGAGCGT AATATTTCTA CCGCTGAAGA TCCGGTTGAG
ATTAACCTTG AGGGTGTAAA CCAAGTTCAC ATTAATTTAA AGGCAGGGCT AACCTTCGCG
TCCGCTTTAC GTTCATTTCT ACGCCAAGAC CCCGATGTGG TGATGGTCGG GGAAATCCGC
GATCTTGAAA CTGCAGAGAT TGCCATTAAA GCGGCGCAAA CGGGTCACTT AGTCTTATCA
ACCTTGCATA CTAACTCGGC AGCCGAAACC TTAACCCGTT TAATCAATAT GGGTGTTCCA
GGCTACAACA TAGCTAGCTC TGTGAATCTG ATTATTGCCC AGCGCTTAGC GCGTCGTCTA
TGCCCCGAAT GTAAACAAGC GGAAGTGATC CCCGAGCATG AATTACTTCG TCTAGGTTTT
GCCCAAGCAC AAATTACTCA GGGCTTTACC ACCTTTAAAC CCATTGGCTG CGAACATTGC
TCTGCAGGCT ACAAGGGACG GGTTGGCATT TATGAAGTGA TGAAAATGTC TGACGAAATA
GCCCGCACTA TCATGGAAGG GGGGAACTCT TTACAAATCG CCTCCCAAGC TAAAGCGCAA
GGAATGCGGG ATTTGCGTCA ATCGGGATTA TTGAAAGTGA TCCACGGTGT TACTAGCATT
GCAGAAGTCA ATCGCGTCAC AAGTTTTGGC TAA
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| Protein sequence | MPTTGLHLGL STLFIRKGLL NEEQMANAIT KSRQNKHALV STLVQSQLVS ARAIAELCYE
EYGTPLLDLN EFDLASIPED FLNKKLIEKH RCLPLFKRGN RLYIGTSDPT NIAALEDFQF
SAGLHAEAIL VEEDKLAKAL EKILEEDISG LDLGGMDEAA LAAIEITDTD RRSEESTGES
SDDAPIVIYI NKILTDAIRK GASDLHFEPY EKRYRIRFRI DGILHEVSEP PISLAGRLSA
RLKVMSKLDI AERRVPQDGR IKMKLSRTKS IDFRVSTLPT LWGEKIVMRI LDSSSAQLGI
EKLGYEPDQE KLYLEMLAKP QGMILVTGPT GSGKTVSLYT GLNILNTEER NISTAEDPVE
INLEGVNQVH INLKAGLTFA SALRSFLRQD PDVVMVGEIR DLETAEIAIK AAQTGHLVLS
TLHTNSAAET LTRLINMGVP GYNIASSVNL IIAQRLARRL CPECKQAEVI PEHELLRLGF
AQAQITQGFT TFKPIGCEHC SAGYKGRVGI YEVMKMSDEI ARTIMEGGNS LQIASQAKAQ
GMRDLRQSGL LKVIHGVTSI AEVNRVTSFG
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