| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4057 |
|---|
| Symbol | |
|---|
| ID | 5755880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4789635 |
|---|
| End bp | 4790198 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641290407 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_001556477 |
|---|
| Protein GI | 160877161 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00018717 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.269643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTTTG AATTGGGTTG GTGTGAGGGT GCAAGGCGTT GTGAGTCACC ACATTTTAAT
CAACGTCCCT TGGGTGAAGT GAGTTTGTTG GTGATCCACA ATATTAGCCT GCCAGCAGGT
TGCTTTGGAT TACCTTATAT TGATCAATTA TTTCAAGGGT GCTTAGATAC TAATGCCGAT
GCCAGTTTTG CACAGCTGCA GGGCTTGGAA GTCTCGGCGC ACTTTTTGAT CCGCCGTAAT
GGCGAGCGTG TGCAGTACGT GAGTTGTAAC GACAGGGCTT GGCACGCAGG GCTTTCTCGT
TATGGTGAGA GAGAGAATTG TAATGATTTC TCCATTGGTA TTGAACTGGA AGGCACAGAT
ACTGAGCCTT ACACACCTGA GCAATATCTG TCGCTGGCAT ATTTGACGAC AGCTCTGTTG
GCTGAGTATC CATCGCTGAG TACCGAACGA ATTGTTGGTC ATTGTGATAT TGCGCCAATG
CGCAAAACAG ACCCTGGGCA AAGTTTTGAT TGGGAAAGAT ATTTAGGGAA GCTAAAGGAA
TATACTCAGG CGTTGCGCTC TTAG
|
|---|
| Protein sequence | MRFELGWCEG ARRCESPHFN QRPLGEVSLL VIHNISLPAG CFGLPYIDQL FQGCLDTNAD
ASFAQLQGLE VSAHFLIRRN GERVQYVSCN DRAWHAGLSR YGERENCNDF SIGIELEGTD
TEPYTPEQYL SLAYLTTALL AEYPSLSTER IVGHCDIAPM RKTDPGQSFD WERYLGKLKE
YTQALRS
|
|---|
| |