| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4051 |
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| Symbol | |
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| ID | 5755874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4776440 |
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| End bp | 4780933 |
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| Gene Length | 4494 bp |
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| Protein Length | 1497 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641290401 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001556471 |
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| Protein GI | 160877155 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.996532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGAAG TAAGCCGTCA CATGCAAACA AAAATAATTA GAACAATTCT GACATGTTTC
ATCCTTTCAT TGACTTGCGT CCACTCGGCT TGGGCGGGCG GTTTTGTGCA GCGAGTTTTT
ACTGATAGGG ACGGTTTAGC GGTCACCAGT ATCCGAGGCT TGGCCTTAGA TGATTACGGT
TTTGTATGGG CCGCGACTGA GCAGGGCTTG TATCGAGTTA GTAACTCTAA GGTGCGGCGT
ATCGATAAAA TCGGCACCGA ATCGCGACTG TCAGATGACT TTTTAACCTC AGTAGTAAAC
ATCGACCGTG ACAAGTTATT GGTTAGCACT AACGCCGCAA TTTACCTCTA CGATATTGTC
CAAAATCAAT TTACCGCCTT TGGTTCCCCC TATTTATTCC CGCAGTTTCC CGGTGGTGCG
CTGGTCTCGG CAGCCCGAAA GAATAGTAAA ACATGGCGAT TGTTAATTGA TAATGGCCAG
ATTTATGAAT TCTCCCCTTC AAAGTCCGAA CTGCGCCTCA TTACTCAGTT GCCGGTTAAT
CGCGATCTTC CTTGGCGCAA ATTGCTGGTC ATGCCTAACG GTCAAATGCT GGTCGCGGGA
ACCTTGCAAT TAGAGTTGCT GGAGCAAAAT GGCGAGCGGG TGTTCCAATA CTCTTGGACT
GAATCTATGG GCAGTATTCT CGATATGTTA GAGGATTCTC AACATAGGAT CTGGATTGCG
ACCGGACGCG GCGTTTATCA ATTAGATCAA ATTTCTAGGC AAATTATCCC CGTGCCAGAA
TTGCCCGATT GGAGCACAGT GATCATTGAG GATGCTAAAG GGGATCTGTG GTTTTCCAGT
CGCATCGGTT TATTGAAATG GTCGCCCGAA ACGCGGCAGA TTGAAAACTA TCAAAAAGAG
TTGAAGGCTG AGGCCAACAT GGAAACGCTG AAAGCCATGT TGTTTGATGA TGCTGGCTTG
ATGTGGGTCG GAGGCTCAGG CGATGGATTG GCTTTATTGG CGTCACAGCC TGATTTCATC
CTCGATACTT ATACTGGCGA TGAACCCTAT CAACTGAGCG ATGCCATGAC TTGGTCAGTA
CATGCCAGTG ATGAAGGGGT TTGGTTAGGT TCTTCCAGTT TAGATTTTAT TGCAAAAGGC
AGTAGCAAAG CGTTTAACGT GCCAATTGAG GGATTTAATC CCCACGAAAG TATTTATGAT
ATCAGTGCGT TTGAGGGACA TTATTTACTG CTATCGACGA CCAGCGGCCT CTTTGTTGTC
GATAAAGACA CTTTGCAAGG CAGTAGCTTT TCTAAATGGA CTCACGGTAA TGATGATTTT
AAAAATAAGC TCATTTATAA AACCTATCGC GACCCTAAGC TGAAAGGACG TGTTTGGATT
GCGACCACAA CAGGGCTGTA TTTTTGGGAA ATGGGACTGT ACGAACCTCA GCCCTTTGAT
ATTGATAAGT CATCGAACAA GTTTGACGGC CCTAAGCGCC CCGTGATCCG CACTATTTAT
CGCACCTCCG ACGGTCGTTT GTGGGTGGGC GGTAAAAAAG TCTTTGGTTA CATCGACAGC
CAAAACGAGT TTCATGATCA GCGGCAGTTG TTTAATGCTT TTGCTGCACA ACCCACGGTC
AGTCATATCG AAGAAATGTC ACCTGGGGTG ATCTGGTTTG GCTCCTATGA AAAAGGTTTA
TTTGAATACC ATCAGCAAAC GGGATCGTTA ATTTCATTGA CCTCCGAGTG GCAATTAAAT
TGTAGTTCAG TGTTTTTTAT TCAAAAAACG CCCAAGTCTA ATCTTGTGGG CTGCTCGGAT
TCTTTGGTGC GACAGGATAT CCAAACGGGC GAGATTGCTA TGTTTAATCA ACTCGATGGT
TTAATTTCCG ATGAGATGAA CGAAGGCGCC TATTTTTACT CACCTAAAAC AGGCTTTTAC
TTAGGCACGC CCGAGGGCGT GATGCGACTC GATGTCGATA GGTTGGCCAA TCGCATTACC
GATGACCATG TGATGCTTGA ATCTGTCTCT GTGTACTATA ACAACACGAC CGAAGTGTCC
CTGTTGCCGC GTAACATAAT GACCATAAAA CCCGAAGCCA ATATGGTCAG TTTTCAAATC
ACTAACTTAG ATTATCTCGA TGATTCGCCC ATCCAATTTA AATACCGATT ACGTTATCAA
GATGAAGAGA GTAATTATGT GCTGTTACAG GGGGAGTCGC AGATTAACCT CGCAGGTTTA
GCTGCGGGTG GTTATGTTTT AGATATTTTA AGTCAGGTCA ATGGAATATG GTCCGATAAA
CCTTTTAACT ATCCCTTTTA TGTTGAGCAG CATTGGTGGC TATCCCAAGG TTTTAAAGGC
ATTTTACTGC TGTTATTTTC TATTATTGCC TTAAGTCTTG CTTGGTATCG GCAGCGCCAG
ATCAATACCT TTAAGCAGAT GAATCAGGCA TTAACTGAGA GTGATGACAG GCTGAGGCAA
TCTTTGCGCG GTAGTGACTC GGATCTCTGG GAATGGCATA AAAATACTCA AGCATTTCAT
CTTGATAATC GCGGTGCCGT TCTCGGTACC CATGCCAATG AGATTGTTGT GAGCTTAGCA
GAGTTGCCTG TGCATCCACA GGATAGGGAA AAAGCGCTCG CTCAGTGGGA TAGCATGATA
TCGGGGGAGA TAGATAGATT CGAAGCCGAG TATCGTTATC AGCGCAAGGA TGGTAATTGG
GGCTGGTTAA GGGTAAGAGG GCGGCCCGTT GCCCGTAATA AGCACTCCAA TGAGATAGAG
CGGGTCGCGG GTATTTATAG TGATATTACC GTGCAACGCC AGTTAGAAGA TGAAGTGAAT
TTACTGGCAA AAGCGTTTGG TAACACATCT GAAGGTGTAC TGATTTTAGA TGTCGAAGGC
AGTATTCGCG TGGCGAATTA CGCGGCACAG CAAATTATCG GTATCGATTC TGCTGATTTA
GTTGGCCAAT CTTTTACCCA ATTTGTACAG ATGAATGACG GTTTGGCATC GGAAATCAAG
CAACTCCTCA GTGATAGCCA GTCTTGGACG GGCGAGCGTG AGTTAATCAA CGCCAGTCAG
CAACCTTGTC CTGTGTGGTT AAACGTATCT GTGATGCAAA GTGCCAACGG GAAAGTGACC
CATTATGTGG TGGTATTCTC GGATATTACC GAACGTAAAC GAACCGAAGC CGATTTACGC
CGCCTAGCCA ATTACGATGT ACTTACTGGA TTGCCAAACC GCTCCTTATT TTCTAGTCGC
CTATTACAGT CTATTCAGGC CGCGCAGCAA ACGGGCGAGA AATTGGCGCT ATTGTTCTTG
GATCTCGATA GATTTAAGCA TGTTAATGAC TCCTATGGTC ATAGCATGGG CGATGCCTTA
CTGGTCGAAG CCTCAAGCCG ACTACAATCC TGTATTGCTA GCGAGCATAT GCTCTGCCGC
TTTGGCGGCG ATGAATTTGT GATTTTGCTC AGAAATGCCA ACAGCATTGA CGAGATCAAC
CACATTGCCG AGCGGCTGCT GGAACAAATT GTGGCGCCTT TTAAGTTATA TGGCCGTGAG
TTTTATATTT CGACCAGTAT TGGCATCAGT ATTTGGCCCG ATGATGCGGT GCAGCCCGAG
GCCTTTATCA AGAATGCCGA TCTCGCTATG TACCACGCCA AAGAAGAAGG GCGGGGGAAT
TTCCAATATT ATTCTTCTGA GCGTAATGCC CAAGCCCTCT ATCATTTACG GCTTGAGGCC
GATTTACGTA AAGCCATAGA GCGGCAAGAG TTCGAGCTTT ATTACCAGCC GCAAATTGAT
ATTTTGCGTA ACGATAAGCT CATTGGAATG GAAGCATTAA TTCGCTGGAA ACATCCGCTG
GACGGCTTTA TTCGTCCCGA TATTTTCATC AAAGTCGCCG AGGCCTGCGG TTTAATTGTC
GATATTGACC GCTGGGTGTT AAGGCAAGCC TGTGTGCAGG GAGCACAGTG GGCGAAACGT
TATGGCGCTA CCTTTAAGTT GTCGGTTAAT ATTTCGGCGG TGCATTTCAG GCAGCCCGAT
TTTATTGAAG ACATACAAAG AATTCTGCAT GAAACCCAAA TGCCGACGGC GTCTTTAGGC
TTAGAAATCA CTGAAGGCGT GTTGATGAAA GAGCTGCACG TCGCTAAAGA TCATCTCTCG
CGATTGAAGT CCTTGGGGAT TGAAGTTGCC ATTGATGACT TTGGGACGGG TTATTCTTCT
CTTGCTTATT TACGCCATTT TGAGGTGAAT ACCTTAAAAA TCGATCGCTC CTTCTTGATT
GATATCGCCA CCAATAAGGC CGATCAGGCG ATTGTGAGCA GTATTATTGA ATTAGCCCGT
AACCTTAAAT TAAATGTGGT TGCCGAAGGG ATTGAGACGG TTGAGCAGTT AGAGCAAGTA
TTTAGCCGCG GCTGTTATAT TATTCAAGGG TATTATTTTG CTAAGCCTAT GTGCGTGGCT
GATTTTGAAC GCTATTTAGA AACAGATAAC AGAATCGTCG CTATTGAGCA TTAA
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| Protein sequence | MYEVSRHMQT KIIRTILTCF ILSLTCVHSA WAGGFVQRVF TDRDGLAVTS IRGLALDDYG
FVWAATEQGL YRVSNSKVRR IDKIGTESRL SDDFLTSVVN IDRDKLLVST NAAIYLYDIV
QNQFTAFGSP YLFPQFPGGA LVSAARKNSK TWRLLIDNGQ IYEFSPSKSE LRLITQLPVN
RDLPWRKLLV MPNGQMLVAG TLQLELLEQN GERVFQYSWT ESMGSILDML EDSQHRIWIA
TGRGVYQLDQ ISRQIIPVPE LPDWSTVIIE DAKGDLWFSS RIGLLKWSPE TRQIENYQKE
LKAEANMETL KAMLFDDAGL MWVGGSGDGL ALLASQPDFI LDTYTGDEPY QLSDAMTWSV
HASDEGVWLG SSSLDFIAKG SSKAFNVPIE GFNPHESIYD ISAFEGHYLL LSTTSGLFVV
DKDTLQGSSF SKWTHGNDDF KNKLIYKTYR DPKLKGRVWI ATTTGLYFWE MGLYEPQPFD
IDKSSNKFDG PKRPVIRTIY RTSDGRLWVG GKKVFGYIDS QNEFHDQRQL FNAFAAQPTV
SHIEEMSPGV IWFGSYEKGL FEYHQQTGSL ISLTSEWQLN CSSVFFIQKT PKSNLVGCSD
SLVRQDIQTG EIAMFNQLDG LISDEMNEGA YFYSPKTGFY LGTPEGVMRL DVDRLANRIT
DDHVMLESVS VYYNNTTEVS LLPRNIMTIK PEANMVSFQI TNLDYLDDSP IQFKYRLRYQ
DEESNYVLLQ GESQINLAGL AAGGYVLDIL SQVNGIWSDK PFNYPFYVEQ HWWLSQGFKG
ILLLLFSIIA LSLAWYRQRQ INTFKQMNQA LTESDDRLRQ SLRGSDSDLW EWHKNTQAFH
LDNRGAVLGT HANEIVVSLA ELPVHPQDRE KALAQWDSMI SGEIDRFEAE YRYQRKDGNW
GWLRVRGRPV ARNKHSNEIE RVAGIYSDIT VQRQLEDEVN LLAKAFGNTS EGVLILDVEG
SIRVANYAAQ QIIGIDSADL VGQSFTQFVQ MNDGLASEIK QLLSDSQSWT GERELINASQ
QPCPVWLNVS VMQSANGKVT HYVVVFSDIT ERKRTEADLR RLANYDVLTG LPNRSLFSSR
LLQSIQAAQQ TGEKLALLFL DLDRFKHVND SYGHSMGDAL LVEASSRLQS CIASEHMLCR
FGGDEFVILL RNANSIDEIN HIAERLLEQI VAPFKLYGRE FYISTSIGIS IWPDDAVQPE
AFIKNADLAM YHAKEEGRGN FQYYSSERNA QALYHLRLEA DLRKAIERQE FELYYQPQID
ILRNDKLIGM EALIRWKHPL DGFIRPDIFI KVAEACGLIV DIDRWVLRQA CVQGAQWAKR
YGATFKLSVN ISAVHFRQPD FIEDIQRILH ETQMPTASLG LEITEGVLMK ELHVAKDHLS
RLKSLGIEVA IDDFGTGYSS LAYLRHFEVN TLKIDRSFLI DIATNKADQA IVSSIIELAR
NLKLNVVAEG IETVEQLEQV FSRGCYIIQG YYFAKPMCVA DFERYLETDN RIVAIEH
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