| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4042 |
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| Symbol | hemE |
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| ID | 5755861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | - |
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| Start bp | 4758400 |
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| End bp | 4759464 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641290388 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001556462 |
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| Protein GI | 160877146 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.984022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT TAAAGAATGA TCGTTATTTA CGCGCCCTAC TAAAAGAGCC AGTCGATGTG
ACCCCTGTGT GGATGATGCG TCAAGCTGGC CGTTATCTTC CTGAATATAA AGCTACGCGC
GCACAAGCGG GTGACTTTAT GTCTTTGTGT AAAAACCACG AGCTTGCCTG TGAAGTCACG
CTGCAACCTC TACGCCGATA TGATCTTGAT GCGGCGATTC TGTTTTCCGA TATTTTAACT
GTGCCTGATG CTATGGGTTT AGGTTTGTAT TTTGAGGCGG GTGAAGGCCC ACGTTTCGAG
CGCCCTACAG ACACTATCGA TGCAATTAAA AAGCTATCAA TCCCAGATCC AGAAGATGAG
CTTGGCTATG TGATGAAAGC CGTGAGCACT ATTCGCCGTG AGCTTAATGG CGCAGTGCCG
TTAATTGGCT TTTCTGGCTC GCCATGGACC TTAGCCACTT ATATGGTTGA AGGTGGCTCG
AGCAAAACTT TCGAAAAAAT TAAAAAGATG GCTTACGCTG AGCCAATGGC ATTACACATG
CTGTTAGACA AGCTAGCTGA TTCAGTGATC TTATACCTGA ATGCCCAAGT CGCCAACGGC
GCACAATCTT TGATGATTTT TGACTCATGG GGCGGCGCGT TATCGCACTC AGCTTATCGT
GAGTTCTCTT TGCGTTACAT GCAGAAGATT ATTGATGGTC TGACACGCTT TGCCGATGGA
CGTAAAGTGC CTGTGACGCT GTTCACTAAA GGCGGCGGTT TATGGTTAGA AGCCATGGCA
GAAACAGGTT GTGATGCGCT CGGTTTAGAT TGGACGGTAG ACATTGCCGA TGCTCGTCGC
CGTGTAGGCC ATAAAGTGGC CCTGCAAGGC AACATGGACC CTTCAATGTT GTATGCACCT
ATTCCACGCA TCGAAGAAGA AGTGGGCCAT ATCCTCGCGG GTTATGGTGA AGGTACTGGT
CATGTATTTA ACTTAGGCCA TGGTATACAT CAGCATGTCG ATCCAGAGCA TGCTGGCGCC
TTTATTAAGG CGGTTCACGC ACAATCAAAG CAATACCATA AGTAA
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| Protein sequence | MAELKNDRYL RALLKEPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNHELACEVT
LQPLRRYDLD AAILFSDILT VPDAMGLGLY FEAGEGPRFE RPTDTIDAIK KLSIPDPEDE
LGYVMKAVST IRRELNGAVP LIGFSGSPWT LATYMVEGGS SKTFEKIKKM AYAEPMALHM
LLDKLADSVI LYLNAQVANG AQSLMIFDSW GGALSHSAYR EFSLRYMQKI IDGLTRFADG
RKVPVTLFTK GGGLWLEAMA ETGCDALGLD WTVDIADARR RVGHKVALQG NMDPSMLYAP
IPRIEEEVGH ILAGYGEGTG HVFNLGHGIH QHVDPEHAGA FIKAVHAQSK QYHK
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