Gene Sbal195_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_4031 
Symbol 
ID5755850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4741790 
End bp4742956 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content45% 
IMG OID641290377 
Productmajor facilitator transporter 
Protein accessionYP_001556451 
Protein GI160877135 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAA TTGCCTTAAC TCAGTCGGCT CAAAAGCCCA GTCTTTTCGT CCCCGTCGCA 
GGGTTAAGTT TGTTTGCTTT GGCATCTGGC TACTTGATGA GCTTAATCCC ACTGTCACTC
ACTTTTTTCG AACTCAGCAC TTCACTTGCC CCATTACTTG CGAGTATTTT TTATTTAGGT
TTACTGCTGG GAGCGCCTTG TATTGCTCCC ATTGTTACCC GTATCGGTCA CAGTAAAGCC
TTTATCCTTT TTTTGAATAT CCTGCTTTGC AGCGTTGTCG CTATGATATT AATCCCCAAA
AGTGGCGTCT GGTTAGCCTC TCGACTCGTC GCGGGATTTG CGGTTGCAGG GATTTTTGTG
GTGGTTGAAT CATGGCTATT AATGGCCGAT ACCCAAAAGC AACGCGCTAA GCGGCTTGGG
CTTTACATGA CAGCGCTTTA TGGCGGTACT GCCATAGGAC AATTAGCCAT AGATTATTTA
GGTACAAAGG GCAATCTACC TTACCTAGTG GTCATGGGAT TATTAGCCGC GGCAAGTTTA
CCTGCGTTAT TGGTAAAACG CGGTCAACCT CAGGTAAGCG AACAACAGTC AATGTCATTG
TCTGCACTAA AAAACCTAAG TCAGCCTGCC ATTATGGGAT GCTTAGTCTC TGGATTATTG
CTCGGCCCTA TCTATGGTTT ACTGCCCATT TATGTGGCAC TGGATATGGG GCTTGATCAG
CAAACAGGAC AATTTATGGC CCTCATCATA GTGGGTGGCA TGCTAGTACA GCCTTTAGTC
AGTTATTTAT CTCCTATATT TAACAAAAGT GGCTTGATAG TGAGCTTTAG CCTACTGGGC
ATCGCGGCAT TATTACTACT CAGTCAGCAT TCAAGTATGA CGCTGATTAT TGGATTTCTA
TTGCTTGGCG CCAGCGCTTT TGCCCTTTAC CCGATAGCAA TCAGTCTAGC TTGTGACAAC
TTGCCTGCTA GCCAAATGGT TTCAGTGGCG CAAGTGATGC TGCTGAGCTA TTCGGTGGGG
TCAGTGATAG GGCCATTAGT TGCCAGCAGC TTTGGCCAAA CGGAGTTCGG CTTACTCATT
TATTTAGGCA TATGCTGTAT TCTGAGCAGT ATTTACATTT TTGCTCAATT GCTTATTAAC
ACTAAGCCCA GTTTTTCTTC GCCTTAA
 
Protein sequence
MEKIALTQSA QKPSLFVPVA GLSLFALASG YLMSLIPLSL TFFELSTSLA PLLASIFYLG 
LLLGAPCIAP IVTRIGHSKA FILFLNILLC SVVAMILIPK SGVWLASRLV AGFAVAGIFV
VVESWLLMAD TQKQRAKRLG LYMTALYGGT AIGQLAIDYL GTKGNLPYLV VMGLLAAASL
PALLVKRGQP QVSEQQSMSL SALKNLSQPA IMGCLVSGLL LGPIYGLLPI YVALDMGLDQ
QTGQFMALII VGGMLVQPLV SYLSPIFNKS GLIVSFSLLG IAALLLLSQH SSMTLIIGFL
LLGASAFALY PIAISLACDN LPASQMVSVA QVMLLSYSVG SVIGPLVASS FGQTEFGLLI
YLGICCILSS IYIFAQLLIN TKPSFSSP