| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_4025 |
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| Symbol | |
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| ID | 5755844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4735045 |
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| End bp | 4737078 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641290371 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001556445 |
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| Protein GI | 160877129 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC CCCAACAAGG TCTCAGCGCT AATACTGGCG ATTGGCCCAA GGCGCTGTTC
TATACCGCCT TAATTTTTTC TATTTTTCAA ATCATCACTG CCGCTTTTCA TCCCGTGTCG
ACTCAAGTGC TGCGCGCCAC CCATATTGGC TTTTTGCTGC TCGTGGTTTT TTTGAGTTAT
CCCGCCAGAG GTAAATCGCA ACCTTGGCAA CCGCTCGCTT GGCTACTCGG TTTAGCAGGC
ATGGCAACGG CGGCTTATCA GTGGTATTTC GAAGCTGACT TAATTCAACG TTCTGGCGAG
CTGACCGATG CGGACATGGT GATAGGTATC ACTTTGATCG TCTTAGTGTT TGAAGCGGCG
CGCCGAGTCA TGGGCTGGGC ACTACCGATT ATCTGCGGCA TCTTTTTGGC CTATGGCTTA
TTGGGTCAAT ACCTACCCGG CGATTTGATG CACCGCGGCT ATGGCTTCGA TCAAATCATC
AACCAATTAG CCTTCGGCAC CGAAGGCTTG TACGGCACAC CAACCTATGT GTCGGCGACG
TATATTTTCC TGTTTATTCT TTTCGGCTCC TTTCTAGAAC AAGCCGGGAT GATCCGTTTG
TTTACCGACT TTGCCATGGG ATTATTCGGC CACAAGCTTG GCGGACCAGC TAAAGTCGCT
GTGGTGTCAT CGGCGCTGAT GGGAACGATT ACCGGCTCAG GAGTGGCGAA CGTCGTCACC
ACAGGGCAAT TTACCATTCC ATTGATGAAA CGATTTGGCT ATCGCTCCGC CTTCGCCGGT
GGCGTAGAAG CGACATCAAG TATGGGCAGC CAGATCATGC CGCCTATCAT GGGCGCCGTG
GCCTTTATCA TGGCCGAAAC CATTAACGTG CCCTTTATCG AGATCGCTAA AGCGGCATTG
ATCCCTGCAC TGCTTTATTT CTGCTCAGTA TTCTGGATGG TGCACTTAGA GGCCAAACGC
GCCAATCTTT GTGGCCTGCC CAAAGATCAA TGTCCCGATC CTTGGGCGGC GATTAAAGAA
CGTTGGTATC TCCTTATCCC CTTGTTTATT TTGGTCTACT TGCTGTTTTC GGGCAGAACG
CCGCTGTTCT CTGGCATGGT TGGTTTAGCG CTCACCTCGA TAGTGATCTT AGGCTCGGCC
ATCATCCTGC GGCTGTCATC AATGGCGATG CGGATTGCCT TTTGGATTGC CCTTGGGGTG
TTATGTGCGG GCTTCTTTCA ACTCGGGATT GGAGTCGTGT TTGGGGTTAT CGCCCTGCTA
GTCGCCATTT GTTGGTTTAT TAAGGGCGGC AAAGAAACCC TCACCGTTTG CTTACACGCA
TTGGTTGAAG GCGCGCGTCA TGCTGTGCCT GTGGGTATTG CCTGCGCCTT AGTGGGCGTG
ATTATCGGCA TAGTGTCACT CACAGGGATT GCTTCAACCT TCGCGAGCTA CATTCTCGCC
GTTGGCCAAG ATAACCTGTT CTTGTCACTC GTGTTGACTA TGATCACTTG CCTAGTGCTC
GGTATGGGGA TCCCGACGAT TCCTAACTAC ATTATTACCA GCTCAATAGC CGCACCCGCA
TTGCTCGACT TAGGCGTGCC GCTAATTGTG TCGCACATGT TTGTGTTCTA TTTCGGCATC
ATGGCCGATC TCACGCCACC CGTTGCCTTG GCCTGCTTTG CCGCAGCGCC GATTGCGAAG
GAATCCGGGC TTAAGATCAG TCTCTGGGCG ATTCGTATTG CCATTGCTGG TTTTGTGATC
CCCTTTATGG CGGTTTACGA TCCAGCCTTA ATGCTCCAAG GTGATAGCTT ATTAGCGACG
GGCTTTGTGG TGCTGAAGGC AACGGTTGGT ATTGGTATTT GGGGCGTGAT CTTTACCGGA
TATCTACTAC AAAAACTCTA CTGGTGGGAA CGCGTTATCG GTTTCCTTGC GGGTGCAAGT
TTAATCCTTG CGACGCCATT GAGCGATGAA ATCGGCTTTG GACTCGCGCT GTTGTTTATC
GTGCAGCACA GTTGGCGCGC GCGCAAACTC AAACGTCTGG CAGAGCAAGG ATAA
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| Protein sequence | MSDPQQGLSA NTGDWPKALF YTALIFSIFQ IITAAFHPVS TQVLRATHIG FLLLVVFLSY
PARGKSQPWQ PLAWLLGLAG MATAAYQWYF EADLIQRSGE LTDADMVIGI TLIVLVFEAA
RRVMGWALPI ICGIFLAYGL LGQYLPGDLM HRGYGFDQII NQLAFGTEGL YGTPTYVSAT
YIFLFILFGS FLEQAGMIRL FTDFAMGLFG HKLGGPAKVA VVSSALMGTI TGSGVANVVT
TGQFTIPLMK RFGYRSAFAG GVEATSSMGS QIMPPIMGAV AFIMAETINV PFIEIAKAAL
IPALLYFCSV FWMVHLEAKR ANLCGLPKDQ CPDPWAAIKE RWYLLIPLFI LVYLLFSGRT
PLFSGMVGLA LTSIVILGSA IILRLSSMAM RIAFWIALGV LCAGFFQLGI GVVFGVIALL
VAICWFIKGG KETLTVCLHA LVEGARHAVP VGIACALVGV IIGIVSLTGI ASTFASYILA
VGQDNLFLSL VLTMITCLVL GMGIPTIPNY IITSSIAAPA LLDLGVPLIV SHMFVFYFGI
MADLTPPVAL ACFAAAPIAK ESGLKISLWA IRIAIAGFVI PFMAVYDPAL MLQGDSLLAT
GFVVLKATVG IGIWGVIFTG YLLQKLYWWE RVIGFLAGAS LILATPLSDE IGFGLALLFI
VQHSWRARKL KRLAEQG
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