| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3993 |
|---|
| Symbol | |
|---|
| ID | 5755812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | - |
|---|
| Start bp | 4703121 |
|---|
| End bp | 4703996 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641290339 |
|---|
| Product | copper ABC transporter, permease protein |
|---|
| Protein accession | YP_001556413 |
|---|
| Protein GI | 160877097 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAT CAGAGGTTTG GCAGTGCGGC CATTTAAGTG CCCTAAGTAT AGTGAGTACC
ATAGCTACCA AGGAGTTTAA GGACAATTTG CGTAATCGAT GGTTATGGAT GATGGCGGGC
ATATTGCTGC TGCTTTCCCT CAGCGTGAGC TTTATGGGTA GCGTAATATC GGGCAGCTTA
GTGATACTTG AGCCTGCGCA GATCCTTTCT GGGCTTGTTA CTTTATCGGT ATTTATGCTG
CCATTAGGTG CGATCTTGTT GAGTTATGAC AGCTTTGTTG GTGAGAAAGA ATCTGGCACT
TTATTGTTAT TACTAACCTA TCCATTGGAG CGTTGGCATC TTGTCTGCGG CAAGTTTTTG
GGCCATGCGT GCGTGATGGC TATCGCCTGT ATCTTAGGTT TTGGTTTGAC TGGATTATTA
CTGATACTAC TTGGCGATGC TCAGGCTCAA TTCGCGATAG TTATCGGATT TATCCATTTG
ATAATAAGTA GTATTTTGCT GTCATTAGTG TTTGTTCTAT TGGGGTATTG GGTTAGTTTG
TGTGTGCGAG AAAAAGCTAA GGCATTGGGG ATGTTACTTA TTTTATGGTT TGTGCTCGTG
CTAGTTTATG ATCTTATTTT GCTCAGTGTT TTGGTTGGAA TGAGTGAAAT GCTTAATCGC
AATCTATTTA ATCTACTCAT TCTATTGAAC CCTACCGACT TGTTTCGTGC CTTAAATTTG
CTTGCCACAT CGTCGGATAC ACTAGCAGCT AAAAGTAGCC TTTCCTTAAT CGCGCAAACT
GGATTGGGAT TACCTATGAT GTATGGTTTG TTAGGCGGCT GGATTATTGT TCTATTATTG
GGGTGCTCTT GGGTCTTCAA ACGTCAAGAA ATTTAG
|
|---|
| Protein sequence | MSQSEVWQCG HLSALSIVST IATKEFKDNL RNRWLWMMAG ILLLLSLSVS FMGSVISGSL
VILEPAQILS GLVTLSVFML PLGAILLSYD SFVGEKESGT LLLLLTYPLE RWHLVCGKFL
GHACVMAIAC ILGFGLTGLL LILLGDAQAQ FAIVIGFIHL IISSILLSLV FVLLGYWVSL
CVREKAKALG MLLILWFVLV LVYDLILLSV LVGMSEMLNR NLFNLLILLN PTDLFRALNL
LATSSDTLAA KSSLSLIAQT GLGLPMMYGL LGGWIIVLLL GCSWVFKRQE I
|
|---|
| |