Gene Sbal195_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3987 
Symbol 
ID5755806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4692458 
End bp4694149 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content44% 
IMG OID641290333 
Productamidohydrolase 3 
Protein accessionYP_001556407 
Protein GI160877091 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA CTAAGACGCC ACACAAACTC GTTAAATGCT TAGCCTTAAC GGGATTATTC 
ACCCTATCTG CCTGTGCAAA CGACGAACTT GCAGATACTT TACTCACCAA TACCCACGTC
TATGGCCATG ATCAAGCGAC TAGTTTAGCC ATTAAGGATG GCAAAATTGT CTACATTGGG
AATAGCATTA ACGCCATGGA TCACGTGAGC AATCAAACCA AAGTCATCGA TTTAAAAGGT
CATTACTTAT TACCTGGTTT CATTGATAAC CATAATCATG TGTTTGAAGC CGCGAGTGAA
ATAGGTAGCG ACTGTTTACT GGATGATGAC ACTAATCTCA ACGGCTATAT CCGCACATTA
ACCGCCTGTA AAAATCAGTT GGAAACGGGA GAGTGGTTAC TCGGCTATGG CCATCAACTC
AGTGTAGTAA TGCAAGAGAA TGGCCCCACT CCTTTGGCAA TATTAGACAA AATCTTCCCC
GATAATCCTG TCGTTATTAT GGAGCAAACA TCCCATTCTA TGTGGGTCAA CTCCCTCGCA
TTAGCCAAAG CTAAGATAAG CGCTCATACA GCCGATCCGC AAGGCGGCAA GATCCTCAAA
GATGAAGAGA GCGGTAAACT TCTCGGTATT TTATTCGATA ATGCTGGCGA TCTTGTGATG
GAACAAGCAT GGAAATCACA ACCCAATCTA CAACAAGCCA ATTATCAAGG TTTATTAAAT
GGTCTGGCAG CTGCTGCCGA GCACGGGATA ACGACTATCG GTGATGGACG ACTCTATTGG
AAACGTGACT GGTTAGAAAC ATGGCTAGCC GTCGAAAGTC ATGATGAATT AACCGCCAGA
GTCAGTCTAC GCCCTTGGAT TTATCCTGCC GATGAACCCC AAGCACAGCT TGATTTCTTT
AAAAAAATTC ATTCTGATGA TAAACAACGT CTGCTGCTCA TCAATCAGGT CAAAATCTAC
AGTGATGGCA TCATCATAAA CGGTACTGCC AGTACATTAG CCCCCTATGA TTGGAGCTAC
ACCCCCGAAC TTCCTAGGGG ACTCGAGTAT GTTCCTGCCA GTAAAATGAC GTGGTGGCTT
ACTGAACTCA ACAAAATTGG ATACGGGGCA CATATTCATG CCATAGGTGA TGCAGGGGTA
CGCAACACCT TAGATGCTAT TGAAACTTTA CGATCTCAGG GAGCTACTCG CCCTTATGCC
ATGACGCATT TAGAAATGGT ATCTCCCCAA GATATCAAAC GCTTTGCCTC ACTAAAAGTC
GATGCCGATT TCCAATTGGG TAGCGATTAC ATTGCTGCGC AGGATCATGA GTGGGCGATC
CCTTTTATCG GTAAGCAACG AGCTCATGCT TTATTACCTA TTAACCCTAT TTTCAAGACT
GGCGCGAATG TAACTTTAAG TAGTGACTGG AATGTGAATG ATATCAATCC ACTCGTTGGT
ATTGCTAACG CAGTCTATCT GCAAAATGCA GGCATCACCG ATATTCACAG TGCTATTGCA
GCCTATACAA TAAATCCCGC TAACGCCTTG GGCATAAGTG ACATTACTGG TTCTATCGTG
CTAGGGAAAT CTGCCGATTT TGTTGTATTA GAGCGAGACA TTACCCAAGC TACAGCAAAA
CAAATTGCTG ACACTCAAAT TTTAATGACG TGGTTAGAGG GGGAGCTAGT GTTCGATCTC
AATGATCAAT AG
 
Protein sequence
MKQTKTPHKL VKCLALTGLF TLSACANDEL ADTLLTNTHV YGHDQATSLA IKDGKIVYIG 
NSINAMDHVS NQTKVIDLKG HYLLPGFIDN HNHVFEAASE IGSDCLLDDD TNLNGYIRTL
TACKNQLETG EWLLGYGHQL SVVMQENGPT PLAILDKIFP DNPVVIMEQT SHSMWVNSLA
LAKAKISAHT ADPQGGKILK DEESGKLLGI LFDNAGDLVM EQAWKSQPNL QQANYQGLLN
GLAAAAEHGI TTIGDGRLYW KRDWLETWLA VESHDELTAR VSLRPWIYPA DEPQAQLDFF
KKIHSDDKQR LLLINQVKIY SDGIIINGTA STLAPYDWSY TPELPRGLEY VPASKMTWWL
TELNKIGYGA HIHAIGDAGV RNTLDAIETL RSQGATRPYA MTHLEMVSPQ DIKRFASLKV
DADFQLGSDY IAAQDHEWAI PFIGKQRAHA LLPINPIFKT GANVTLSSDW NVNDINPLVG
IANAVYLQNA GITDIHSAIA AYTINPANAL GISDITGSIV LGKSADFVVL ERDITQATAK
QIADTQILMT WLEGELVFDL NDQ