Gene Sbal195_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3980 
Symbol 
ID5755799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4685381 
End bp4685821 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content51% 
IMG OID641290326 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001556400 
Protein GI160877084 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACA AAATTTTGCT CGTCAATGGC CCCAATCTCA ACCTCTTAGG TCGCCGCGAG 
CCCAGCGTTT ATGGTCATCA AACCTTGGCC GACATAGTGG CGGAGTTAAA TCAGCAGGCA
AAGTTAGCGG AAGTTGAGCT TGAGCATATT CAGTCAAACG CCGAGTTTGA GTTGATCAAC
GCGATTCATG CGACCGATGC GCAGATGATC ATTATCAATC CCGCCGCCTT TACCCATACT
AGCGTAGCCC TGCGTGATGC CTTGCTTGGC GTCGCGATTC CGTTCTTTGA AGTGCATTTA
TCCAATGTGC ACGCCCGTGA AGCCTTCCGT CACCATTCCT ATTTTTCTGA TAAGGCGATA
GGCGTGATTT GCGGTTTCGG TTCTCAGGGT TATGAGTTTG CACTGGCGGC AGCCATTAAG
CGGCTCAACC AGCCACTGTA A
 
Protein sequence
MSHKILLVNG PNLNLLGRRE PSVYGHQTLA DIVAELNQQA KLAEVELEHI QSNAEFELIN 
AIHATDAQMI IINPAAFTHT SVALRDALLG VAIPFFEVHL SNVHAREAFR HHSYFSDKAI
GVICGFGSQG YEFALAAAIK RLNQPL