Gene Sbal195_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3979 
Symbol 
ID5755798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4684700 
End bp4685131 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content47% 
IMG OID641290325 
Productpeptidyl-tRNA hydrolase domain protein 
Protein accessionYP_001556399 
Protein GI160877083 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAGT TTGCCATGAT AAAAATCTCA AACCGTGTGG AACTTCAGGA AAATGAAATC 
GAGTGGCAAT TTATCCGTTC GAGTGGCGCT GGCGGCCAGC ACTTAAATAA AGTGTCCACC
GCTGCGCAGC TGATCTTCGA TATTAAAAGC TCATCATTAC CCGAGTTTTA CCAAGAACGC
CTGCTCAACA AGGCCGATCA CCGCATCACT AAAAGCGGCA AAATCATCAT TAAATGCCAA
GCGAGTCGCA GCCAAGATGC CAACAGCCAA ACGGCGTTGG AGCAATTTAT CGCCTTAGTC
GCCAGTGTCG GTGAAGTGCA AAAAAAACGC ATTCCTACCC GCGCAACTAA AGGCAGCCAA
ACGCGGCGAT TAGAGTCCAA GAAACAAAAA GGCGCCACTA AAGCCATGCG TCAGCAAAAT
ACTGACTATT AG
 
Protein sequence
MPKFAMIKIS NRVELQENEI EWQFIRSSGA GGQHLNKVST AAQLIFDIKS SSLPEFYQER 
LLNKADHRIT KSGKIIIKCQ ASRSQDANSQ TALEQFIALV ASVGEVQKKR IPTRATKGSQ
TRRLESKKQK GATKAMRQQN TDY