Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3970 |
Symbol | |
ID | 5755789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | + |
Start bp | 4674688 |
End bp | 4675632 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641290316 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001556390 |
Protein GI | 160877074 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGATC TCAATCGCGT GCAAATTTTC GCTCAAGTCG TCGAGCAAGG CAGCTTTACG GGCGCCGCCA AAGCCCTTGG GATCACTAAG GCAACCGTCA GTCGTAAGAT AGCCGAACTC GAAGCCGATA CTGGCACACA ACTGTTATTT CGCACCACCA GAGCCCTAAA ACTCACCGAG GCAGGATCGA GTTATTACAA TAGGATCAAT AAGATCCTCA CCGATCTGCA GAGCGCCGAA AATCAGCTCA GCGCCCAGCA ACAATTGATC AAAGGTAATC TAAAAATTGT CTGCCCGATT GAATTAGGTC AATTGTTTTT AGGGCCAATT TTTGCTCAGT TTTTAACGCT TTACCCCGAT ATCACCATCG AGGCCGAACT CACAAACCGT AAGGTCGATG TCATAGAAGA AGGTATCGAT CTGTTATTTC AAATTGCCGA TTCGGGTGAC ACTCGCCTGC AAAGCTATGC CTTAGTCAAC GCCCATAAAT CGTTAATGGC AAGCCCTGCT TATTTGGCCG AGCACGGCAC CCCCAAAGTG CCACAGGATT TAGCCAAACA TAAAGCGATC CGCTTACAGT CGGCGCATAT TGAAGGAGCA TGGAAGTTAT TCGATGGCAA AACTTGGATT GTCGCCGAGC CTATGACTCA ACTGACGGTA AACAATGTCA CTTTAGCCCG CGAGGCCGCC ATTGCAGGGC TTGGGATCAC AGCGGTGCCC TCCATCATTG CCCAAGTGGC ATTAGAAAAA GGCTACTTAA TCCCGCTGCT TGATGACTAT CCTATGGTCC AAACTAAGGT CGTGCTCAGT TATCCCCAAC GGGCCTACTT ACCCCGAAAA TATCGCGTCT TTATCGAATT CATCTATTCC GCATTATTTA AACGTTGGGG ATCGCAAGTA TTGGAAGTGC CCGATTTTAT CGGCCAAGCC GATCAGGGCG AATAA
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Protein sequence | MMDLNRVQIF AQVVEQGSFT GAAKALGITK ATVSRKIAEL EADTGTQLLF RTTRALKLTE AGSSYYNRIN KILTDLQSAE NQLSAQQQLI KGNLKIVCPI ELGQLFLGPI FAQFLTLYPD ITIEAELTNR KVDVIEEGID LLFQIADSGD TRLQSYALVN AHKSLMASPA YLAEHGTPKV PQDLAKHKAI RLQSAHIEGA WKLFDGKTWI VAEPMTQLTV NNVTLAREAA IAGLGITAVP SIIAQVALEK GYLIPLLDDY PMVQTKVVLS YPQRAYLPRK YRVFIEFIYS ALFKRWGSQV LEVPDFIGQA DQGE
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