Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3946 |
Symbol | |
ID | 5755765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4648302 |
End bp | 4650035 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641290292 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001556366 |
Protein GI | 160877050 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTAC TACTGATCGA TGATGATGAA GTCGATAGAA CGGCAATTAT CCGAGCACTT AGACAGTCGA AATTGACGTT TAATGTGATC GAAGCAAATT GTGCATTTGA TGGGTTAAAT CTTGCCTTAG AACGTCATTT CGACGGCATT CTATTGGATT ATTTATTGCC CGATGCCAAT GGGTTAGAAG TGTTAATTAA GCTCAATGCC ATGACGCAAG ATCAGACTGT GGTCGTGATG CTGAGTCGCT ATGAAGATGA AAAACTGGCC CAGCGCTGCA TTGAATTAGG TGCGCAGGAT TTTCTGCTTA AGGATGAGGT TAACTCGCGG ATCTTAACCC GTGCGATTCG CTACGCGAAA CAAAGATCTT CAATGGCATT GGCGTTACGC AATAGCCATC AAAAACTAAA AGAGCTGGCC GAGCACGACT CGCTCACTAA GCTGGTTAAT CGCTATGGTT TTGAACTGTG TCTTAATCGA GCGATTGCAA GGGCGAAACG CTGTCACGAT TATTTGGCTG TTATCTTACT AGATCTCGAT GATTTCAAAG CGATTAACGA CACATTAGGC CACCAAACGG GTGATGTGCT GTTACTCAAA GTGGCGGCTC GATTAAGTGA AGTGCTGCGA GATGGTGACA TTATTGCCCG TTTAGGTGGT GACGAATTTG TCGTACTCGT GACAGATAAC GATTATAAAT ATTTCCCCAT GATAGTGGCC AATCGACTGC TCAAAGTATT TGAGGATGAA TTTTGCCTCG GTGATAACGA TGTGCTTATC GGTGCCAGTA TCGGTGTGGC TTTTTATAAT GAAGCGGCTT CGAACAGTTC TGAGCTGATG AAATGCGCCG ATATCGCCAT GTATCGTGCT AAAAAGATGG GCCGAAACCA GATCCAGTTT TATTCCGAAG CCTTAGATAA AGAAGTACGC TACCGCAATC ATATCGAATC AAGTTTGCGT ATGGCCTTAA AAAGAAATGA ATTTAAGGTC CATTATCAAG CACAGGTTAA TGCGAAAACC CATCAGCTGG TGGGGATGGA AGCCCTTATC CGATGGCAGC ACCCAGTGGA TGGTATTATC GCTCCAGATC AATTTTTGCC CATAGCCGAA GAAATTGGAT TAATGGATGA CATTGATGAT TGGGTGCTTG AACAAGCCTG CACCCAGGCA CAGGTTTGGT TAAGCCAATT ACAGCCCCTA GGCCAAGAAT TCACTATCGC GGTTAACCTC TCTGCATCTC AAATCGGAAA TGAGAACCTG TTTGATAAAA TCGTGCATAC ACTGACGAAG ACAGGCTTGC CTGCTGGAGC ATTAGAGCTT GAAATTACAG AAAATTGCCT TATTGAAGAT CCCCATGAAC ATGCCAAAGT GCTCGATAGA ATCGCCGGAT TAGGGGTGCG TTTTGCCCTC GATGACTTCG GGACGGGTTT TTCGTCATTG GAACACATCA AACTGTTTCC GATCAGCGTA CTGAAAATCG ATAAAAGCTT TGTCGCTTCC TACGATAAGG ATGAAAAAGA TACCCGATTG CTCGCCGCTT TACTCAACTT TGCCTATGGG TTTAATGTTA TTTCTGTGGC GGAGGGTGTT GAAACGTTTG AGCAAGCAGA GTTTTGCACT GCTCGCCATT GCACTGTTTT ACAAGGGTAT TTATTTTCGC GCCCCTTAGA TGCCGCGGCG TTTGAGGCCA AGTATATTCT GCCACTACTA ACCCAAACTC AGCTCCCAGT GTGA
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Protein sequence | MDLLLIDDDE VDRTAIIRAL RQSKLTFNVI EANCAFDGLN LALERHFDGI LLDYLLPDAN GLEVLIKLNA MTQDQTVVVM LSRYEDEKLA QRCIELGAQD FLLKDEVNSR ILTRAIRYAK QRSSMALALR NSHQKLKELA EHDSLTKLVN RYGFELCLNR AIARAKRCHD YLAVILLDLD DFKAINDTLG HQTGDVLLLK VAARLSEVLR DGDIIARLGG DEFVVLVTDN DYKYFPMIVA NRLLKVFEDE FCLGDNDVLI GASIGVAFYN EAASNSSELM KCADIAMYRA KKMGRNQIQF YSEALDKEVR YRNHIESSLR MALKRNEFKV HYQAQVNAKT HQLVGMEALI RWQHPVDGII APDQFLPIAE EIGLMDDIDD WVLEQACTQA QVWLSQLQPL GQEFTIAVNL SASQIGNENL FDKIVHTLTK TGLPAGALEL EITENCLIED PHEHAKVLDR IAGLGVRFAL DDFGTGFSSL EHIKLFPISV LKIDKSFVAS YDKDEKDTRL LAALLNFAYG FNVISVAEGV ETFEQAEFCT ARHCTVLQGY LFSRPLDAAA FEAKYILPLL TQTQLPV
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