Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3930 |
Symbol | |
ID | 5755749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4634049 |
End bp | 4635806 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641290276 |
Product | formate--tetrahydrofolate ligase |
Protein accession | YP_001556350 |
Protein GI | 160877034 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGACAG ATATGGATAT TTCGAGTCGC GCAAGCCTTA AAAACATCAC CGAAATTGGC GTCGACTTAG GCCTGTTACC CGAAGAGATG ATGCTATTTG GTCACACTAA AGCCAAGGTG GAGCTCAGTG TGTTGCAGCG TTTAGCGGGG CAACGCAAAG GTAAATTGAT TATCGTCACC GCAGTTACGC CTACTCCCCA CGGCGAAGGT AAAACGGTGA CGAGCATTGG CTTAACACAA TCGTTAAATG CCATAGGCCA AAAGGCCTGT GCTTGTATTC GCCAGCCTAG CATGGGACCT GTGTTTGGGG TGAAAGGCGG TGCTGCGGGT GGCGGTTATG CGCAAGTGGT GCCCATGCAG GAGATGAACT TACATCTCAC GGGTGACATT CATGCCGTCA GCAGTGCCCA CAATTTAGGG GCGGCGGCGA TTGCGGCGCG GCTATTCCAC GAGGCGCGCT TAGGTAAAAC AGAATTTGAA GCGCAATCTG GACAAGCGTT TTTGGATATA GCTCCCAACG AGATCCGCTG GCACCGAGTG GTCGATCATA ATGATCGCTG CCTTAGGCAA ATTCATGTGG GCTTAGGTGA TAATAACGGC CCAGAGTACG GATCTAGCTT TGATATTACC GCCGCCTCTG AGTTGATGGC GATTTTAGCC TTAAGCCATG ATTTGGCGGA CATGCGGGTG CGGATCGGTC GTTTAGTGTT GGCCTTAAAT ACCCAAGGGC AAGTGATTAC CGCCGAAGAT TTAGGTGTCG CTGGGGCGAT GACGGCCATC ATGGCCGATG CGATAAAACC GACGTTAATG CAGACCTTAA ATGGCTCGCC TTGTCTGATC CATTCGGGAC CCTTTGCCAA TATTGCCCAC GGTAACTCGT CGATCATTGC CGATGATATC GCCCTTAGGC TGGCGGACTT TGTGGTGACT GAAGGCGGTT TCGGCTCGGA TATGGGCTTT GAAAAGTTCT GTAATATCAA GGTTCGTCAA TCGGGTCAGG CGCCAGCTGC CGCTGTGTTG GTGACGACTT TAAAAGCGCT GAAGGCCAAT AGTGGCTTGG CAACTGAGGT GGATAGCAAT GTATCAAATA TCCATGTGCC AAAGATCAAT GCGGCAAACA TCAATGCCCC AGATCAGGCT CGACTCGAAG CGGGCTTTGC AAATTTAAAC TGGCATATCA ACAATGTGGC GCGTTATGGC ATTCCTGTGG TGGTTGCTAT TAACCGTTTC GCCACTGATT CCGATGCTGA GTTGCAATGG CTAATGGAAG CCGTCAACGC GAGTGCTGCC TTTGGCTGTG AAATTAGCGA TGCCTTCAGC CAAGGGGAGG CGGGCGCTAT TGCCTTAGCG CAAACTGTGG TTCGCGCCGC TGAAATTGAG AGTCAGTTCA AGCTGTTATA TCCAGATGAA GCGTCATTGG AGGCAAAGTT ATCCACCTTA GCCGAAGTGG GTTATGGCGC TGCAGGCGTG AGTCTTTCTA TCGAGGCGAA ACAGCAGGCG CAGCAACTGA CCGCGCTTGG CTATGGGCAT TTGCCTTTGT GTATGGCCAA AACGCCGTTA TCCATTAGCC ACGATCCTAG CTTAAAGGGT GTTCCTAAGG ATTTTGTGGT GCCAGTGCGA GAGTTAGTGT TACATGCGGG GGCGGGATTT ATAACTGCCT TAGTGGGTAA TGTGATGACT ATGCCAGGAC TTGGGCTTAA ACCGGGATAC TTGAAAATCG ATATTGATGC CAAAGGTGAG ATAGTCGGTT TAGGCTAA
|
Protein sequence | MLTDMDISSR ASLKNITEIG VDLGLLPEEM MLFGHTKAKV ELSVLQRLAG QRKGKLIIVT AVTPTPHGEG KTVTSIGLTQ SLNAIGQKAC ACIRQPSMGP VFGVKGGAAG GGYAQVVPMQ EMNLHLTGDI HAVSSAHNLG AAAIAARLFH EARLGKTEFE AQSGQAFLDI APNEIRWHRV VDHNDRCLRQ IHVGLGDNNG PEYGSSFDIT AASELMAILA LSHDLADMRV RIGRLVLALN TQGQVITAED LGVAGAMTAI MADAIKPTLM QTLNGSPCLI HSGPFANIAH GNSSIIADDI ALRLADFVVT EGGFGSDMGF EKFCNIKVRQ SGQAPAAAVL VTTLKALKAN SGLATEVDSN VSNIHVPKIN AANINAPDQA RLEAGFANLN WHINNVARYG IPVVVAINRF ATDSDAELQW LMEAVNASAA FGCEISDAFS QGEAGAIALA QTVVRAAEIE SQFKLLYPDE ASLEAKLSTL AEVGYGAAGV SLSIEAKQQA QQLTALGYGH LPLCMAKTPL SISHDPSLKG VPKDFVVPVR ELVLHAGAGF ITALVGNVMT MPGLGLKPGY LKIDIDAKGE IVGLG
|
| |