| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3920 |
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| Symbol | |
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| ID | 5755739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4625454 |
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| End bp | 4626440 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641290266 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001556340 |
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| Protein GI | 160877024 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00763336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATG ACCAAAGCGC AATGAACGAA CTACACTGGC TCATCGATAT GGTGCAAACC
ATAGAGGTGG GATTAGTGGT ATTAGATCGC CATTACAATA TCCAGCTGTG GAACGGTTTT
ATGGAGAATC ACAGCGGTGT TTCCCCTAAT TCGATCAAAG GTCAAAACCT GTTTACCCGC
TTCCCCGATC TGCCCGTCAC TTGGTTAAAG CAGAAAATGG AATCGGTTTT TATGCTTAAA
AACCGTGCCT TTATCAGCTG GGAACAACGT CCATACGTTT TCCAATTTAA AAACTACCGC
CCGATCACGG GCCGTGCTGA CTACATGTAC CAAAACGTGA CCTTGTTGCC ACTGGCATCG
CTCACGGGAC AAGTGACCCA TATCAGCGTG ATTATTTATG ACGTGACTGA TATCGCCATC
AACAAGTTAC AACTTAAAGC CGCGAACGAG CAACTCGAGC GCCTAAGCCA AACCGATGGC
CTGACTCAGC TGCATAACCG TCGCCATTGG CAAGAATGTT TAGACCATGA GTACGACATA
TATGCCCGCT ACTCAGGCAT GGCAAGTTTA GTGATGATAG ATATAGATAA CTTTAAACAT
ATCAACGACA GCTATGGTCA TGTGGCGGGT GATAAAGTGA TCCAGCATAT CGCCCACTTA
CTCAGCCAAT CCCTGCGTGA GACCGATTGC GCCGGACGTT ATGGCGGCGA AGAATTTGCA
GTCGTATTGC CCAAAACTAG CGGCGCCGAT GCCATGTATT TCACCGAGCG ACTCAGGGAA
AAAATCGCCG CATCCGTCAT TCTGTATGAA AGCCTGAAGA TCTCTGTGAC TGTGAGTTTA
GGTGTGTGCG AAATTGGTTC CCACATCACC AGCAGCTCAA GCTGGATTTC TTGCTCCGAT
AAAGCGCTGT ACGAAGCAAA GCAAAAAGGC CGTAATTGCA GCGTTTTGCA TACCAGTACC
AGTGTGAACA AAACGACCCA AGACTAA
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| Protein sequence | MSNDQSAMNE LHWLIDMVQT IEVGLVVLDR HYNIQLWNGF MENHSGVSPN SIKGQNLFTR
FPDLPVTWLK QKMESVFMLK NRAFISWEQR PYVFQFKNYR PITGRADYMY QNVTLLPLAS
LTGQVTHISV IIYDVTDIAI NKLQLKAANE QLERLSQTDG LTQLHNRRHW QECLDHEYDI
YARYSGMASL VMIDIDNFKH INDSYGHVAG DKVIQHIAHL LSQSLRETDC AGRYGGEEFA
VVLPKTSGAD AMYFTERLRE KIAASVILYE SLKISVTVSL GVCEIGSHIT SSSSWISCSD
KALYEAKQKG RNCSVLHTST SVNKTTQD
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