| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3907 |
|---|
| Symbol | |
|---|
| ID | 5755726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4604157 |
|---|
| End bp | 4605092 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641290253 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001556327 |
|---|
| Protein GI | 160877011 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCACA AGTTACTCTT GCTAACGAAG GCAAATCAAC AGTATCGCGA TTTGATTGAG
GCGCAGGAAC TCCCTGATTT AGAGATACTC GACGATAATC CAGCGGGCAT AATTGATGCT
GATATTTGGT TAGCCGAACC TAAACTCGCC GCGCCCCTAT TGCCCCATGC TAAAAATCTG
CAATGGTTAC AATCAAGCTT TGCTGGCATA GATGCTCTGA TGAGCCCAAG GGGCAGAAAA
GACTATCAAC TCACCAATAT TAAAGGCATT TTTGGCCCGC TGATGAGTGA GTTTGTGTTC
GGTTATTTAC TCGCGCATAT CCGTAGTCAT GGTTTTTATC GCCAGCAGCA ACTGCAAAAA
CAGTGGCAAG TTCAACCCCC CATACGCCAC TCAAGTTTAC AAGGAATGCG ATTACTCATA
CTCGGTACTG GCTCAATTGC CCAGCATCTC GCTAAGACGG CAAAGCACTT TGGCATGCAT
GTCACAGGGA TCAATCGTAG TGGTAATACA GTTGAAGGTT TTGATGCTAT TGAAGCGATG
GCCAATTTAG CCCAGATGTT GATGCAAGCC GATGTGGTGG TCAATTTACT GCCCTGCACT
CCGGCAACCC AGAACCTGCT TAACGCTGAA ACCTTAGGTA AGCTAAAAGA TGATGCAGTG
CTGTTTAACG TCGGCCGCGG TGATGCACTC GAGCTCAATG CGCTAAATAT CCAGCTTATC
GCTAAACCTG CTCAACAAGC GGTTTTGGAT GTTTTTGCTC AAGAACCTTT GCCCAATAGT
CATCCCATTT GGGAGCGGGG AAATGCCATC ATCACGCCGC ATATTTCTGC GCCAAGCCAT
CCCGCACAAA TCGTCGAGAT TTTTAGCCAA AACTATGGCC GCTACATTAG CGGTGAGCCA
CTGCAGAATC GAATCGACTT TAGTAAGGGC TACTGA
|
|---|
| Protein sequence | MGHKLLLLTK ANQQYRDLIE AQELPDLEIL DDNPAGIIDA DIWLAEPKLA APLLPHAKNL
QWLQSSFAGI DALMSPRGRK DYQLTNIKGI FGPLMSEFVF GYLLAHIRSH GFYRQQQLQK
QWQVQPPIRH SSLQGMRLLI LGTGSIAQHL AKTAKHFGMH VTGINRSGNT VEGFDAIEAM
ANLAQMLMQA DVVVNLLPCT PATQNLLNAE TLGKLKDDAV LFNVGRGDAL ELNALNIQLI
AKPAQQAVLD VFAQEPLPNS HPIWERGNAI ITPHISAPSH PAQIVEIFSQ NYGRYISGEP
LQNRIDFSKG Y
|
|---|
| |