Gene Sbal195_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3896 
Symbol 
ID5755711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4590730 
End bp4592151 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content47% 
IMG OID641290238 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001556316 
Protein GI160877000 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000116248 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAA ATAACCCTTA TTTTCAAATT ATTATTCTTT CTTTATGTTC TTTTTTATCT 
GTGGCGGCCC ATGCGGCTAA TCAGTTAGAA AGCGTACGCA TTTGGGCTGC GCCTGAGTCG
ACTCGAATCG TGTTTGACTT AAGCGAAGCG CCTGATTACA CCTATTTCTC TTTAGATGGC
CCTAATCGCT TAGTGGTGGA TTTAAAAAAG TCCGCCACTA AAGTTGCGCT TAAAAATCTT
GAAAACAACA GTAAGTTAGT CAAAGGCGTG CGAGTCAGTA AGTCGCCGAC TAAGGGTGAT
TTGCGTTTAG TCATCGATTT GGTGAAACCA CTGAATGCGA GCTTGTTCTC GTTGCCCGTG
ACCGCGCCCT ATGGCAATCG TCTCGTGGTT GATTTAGAAG ATAAAACCTT AACAACCGCC
ACCGCAGTTG TCTCATCGAC ACCCGTTAAA ACCGTTACCC AAGCGGCGCA ATCATCCCGC
GATATCGTGA TTGCTATCGA TGCGGGTCAT GGCGGCGACG ACCCCGGCTC CATTGGCCCT
TCTGGCGTTT ATGAAAAAAA GGTTGCCCTA GAAATCGCCA GACGTGTTTC GAGTAAAATC
AATGACACGC CCGGCATGCG CGCTGTGATG ATCCGCACCG GCGATTATTT TGTGAATTTG
AATAAGCGCT CTGAGTTGGC CCGTAACAGT AAGGCCGATC TGCTGATTTC TATCCATGCC
GATGCTTTTA CTTCCCCAAA TCCTCGCGGC GCCTCTGTGT GGGTATTATC CATGCGTCGG
GCTAACAGTG AAATTGGCCG TTGGTTAGAG CAAAAAGAAA AGCATTCTGA GTTACTTGGC
GGCGCGGGTG AGATTATCCA AAACACGGAT AATGAACAGT ATTTAGCCAT GACGCTGCTC
GATATGTCGA TGAACAGTTC GATGGCCATT GGTCATTCAG TCGCTGGCGA TATTCTTAAG
GATTTAGGCG GTGTGACTGA TTTACATAAG AGTCGCCCCG AGTCGGCGAG TTTAGCTGTG
CTGAAATCAC CGGATATTCC TTCAATCTTG GTGGAAACGG GATTTATCTC GAATCCTAAA
GAAGAGCGTT TGCTGTCGAG TAGTCGTCAT CAAGAAAACA TCGCTAATGC TATCTACAAG
GGTGTGAGTC GTTACTATCA TAATAATCCG CCAGCGGATA CCTTGCTTGC CCAGCGAGGC
GGCGCTAGCT CTAGCAGTGC TAAATCGACT AAAGAGAGAA CGCCAACCGC TTATGTGGGG
AGTTCAACGG CATCGAACGT CAAACATAAA GTCAGTCGTG GCGAGTCTTT ATCGGCTATC
GCGCAGCGTT ATCGTGTGCC TATGTCTAGC ATCAAACAAG CGAATGGGAT GAAGTCCGAT
GTAGTGCAGT TAGGGCAAAC ATTAGTCATA CCCCAGAGTT AA
 
Protein sequence
MIKNNPYFQI IILSLCSFLS VAAHAANQLE SVRIWAAPES TRIVFDLSEA PDYTYFSLDG 
PNRLVVDLKK SATKVALKNL ENNSKLVKGV RVSKSPTKGD LRLVIDLVKP LNASLFSLPV
TAPYGNRLVV DLEDKTLTTA TAVVSSTPVK TVTQAAQSSR DIVIAIDAGH GGDDPGSIGP
SGVYEKKVAL EIARRVSSKI NDTPGMRAVM IRTGDYFVNL NKRSELARNS KADLLISIHA
DAFTSPNPRG ASVWVLSMRR ANSEIGRWLE QKEKHSELLG GAGEIIQNTD NEQYLAMTLL
DMSMNSSMAI GHSVAGDILK DLGGVTDLHK SRPESASLAV LKSPDIPSIL VETGFISNPK
EERLLSSSRH QENIANAIYK GVSRYYHNNP PADTLLAQRG GASSSSAKST KERTPTAYVG
SSTASNVKHK VSRGESLSAI AQRYRVPMSS IKQANGMKSD VVQLGQTLVI PQS