Gene Sbal195_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3876 
Symbol 
ID5755691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4567684 
End bp4569012 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content49% 
IMG OID641290218 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001556296 
Protein GI160876980 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.213045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAA TCCGCACTAA GCTCAGTTTA TGGTTAACGG GCTTACTGGT AATAGGCACA 
GTCATTGGGC TCATCTTGTT TGAGTCCATG CTGCGTCAGG CGTTTCATGA TTCTATTATC
AATCGCTTAG AAGAAGATCT CGAACATATT ATGTTGGCAA CCCATATCCA CGATGGGGAC
ATCAGCATAG ATCAAAGCCA GCTTTCCAGT TTCTACAAGC CCGCCTATTC AGGCCGCTAT
TTCCAGCTTA ACCTGCCCAA TGAAGTCATT CGCTCCCGCT CCCTGTGGGA TATGCAGTTA
GATATCGAGC CACTCGCGCC AAATCAAACC CGTGTCTGGC AAGCTAAAGG CCCTAAAAAT
AACGATATGC AGCTGTTATC ACTGGGGCTA AATTCCAGTA GCGCCAATGT CAGCGCCACC
TTAACTGTTG CCCAAGATTT GAGTATCGGC AGACGCGTGT TTAGCGAAGT CTATGGCACT
AAGCTGGGGA TCAATCTGGC GATGTTGGTG GCTATGATCG CGGGGATCTT CCTCATCCTG
CGTCAATCCT TTAAGCCAGT TAAGCATATT CAGCACGCGC TTTCGCGGCT AAGAGAAGGC
GAGATTAACG CGCTGGAGCT GAATAATATC CCCCCAGAAG TGCAGCCACT CGCTAAGACT
TACAACGAGT TACTCGAGTA CACCGCCAAG CAAATTGAGC GTAGCCGCAA TAACTTAGGC
AACTTAAGCC ATGGGCTTAA AACCCCGCTG GCTGTGATGC AGCAACAGGT CGAAGCCCTT
GGTCTTAAAG ATCCCGAAAC CGCCATTGCC TTGCAGCAAC AGCTGGATTC TATCCACAAG
ATGGTCGAGC GCAAACTGGC GGCGGCAAGG ATCACAGGCG ATATGCTTCC TGCGGCGCAA
TTGGTTATCC CAAGGGATTT ACACAGCCTA GCCAACACCT TAAACAAGGT TCACCGCAAT
AAAACCATCG AATGTGATTT CGAACTCGAC CCTAATATTC TCAGGCTGCC GATCCACAGG
GAAGATGGCA TGGAGCTCCT AGGCAATCTG CTGGACAACG CCTTTAAATG GGCCCAGAGC
CGAGTCAGCA TTCAGTTATC ACGCCAACAG GAGCGTCTCT GCCTTTGTAT CGATGATGAT
GGTCCTGGGG TTGCCGATGA TGAACTAGAT AAACTCACCC AAAGAGGCAC TCGATTAGAT
GAGTCTGTCA TGGGGCACGG TTTAGGTTTG TCGATAGTGA AGGAAATTGC TGAACAGTAT
CAGATTGGGC TTAAGTTTAG CCACAGCACT CGCTTAGGTG GACTGAGGAT CGAACTGACC
TTCAGTTAG
 
Protein sequence
MISIRTKLSL WLTGLLVIGT VIGLILFESM LRQAFHDSII NRLEEDLEHI MLATHIHDGD 
ISIDQSQLSS FYKPAYSGRY FQLNLPNEVI RSRSLWDMQL DIEPLAPNQT RVWQAKGPKN
NDMQLLSLGL NSSSANVSAT LTVAQDLSIG RRVFSEVYGT KLGINLAMLV AMIAGIFLIL
RQSFKPVKHI QHALSRLREG EINALELNNI PPEVQPLAKT YNELLEYTAK QIERSRNNLG
NLSHGLKTPL AVMQQQVEAL GLKDPETAIA LQQQLDSIHK MVERKLAAAR ITGDMLPAAQ
LVIPRDLHSL ANTLNKVHRN KTIECDFELD PNILRLPIHR EDGMELLGNL LDNAFKWAQS
RVSIQLSRQQ ERLCLCIDDD GPGVADDELD KLTQRGTRLD ESVMGHGLGL SIVKEIAEQY
QIGLKFSHST RLGGLRIELT FS