| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3873 |
|---|
| Symbol | |
|---|
| ID | 5755688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 4565967 |
|---|
| End bp | 4566602 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641290215 |
|---|
| Product | cAMP-regulatory protein |
|---|
| Protein accession | YP_001556293 |
|---|
| Protein GI | 160876977 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000159716 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGA TTGGTAAGCC AAAACCTGAT CCAACTTTGG AATGGTTTTT ATCACACTGT
CACATTCATA AGTACCCTGC AAAAAGCACT CTTATTCATG CTGGTGAAGA TTCAGATACT
CTTTATTACA TAGTAAAAGG TTCTGTAGCG GTATTGATTA AAGATGAAGA AGGTAAGGAG
ATGATCCTTT CTTATCTGAA TCAAGGTGAC TTTATCGGTG AACTAGGTTT GTTTGAAGAA
CAAGCCGAAC GTACTGCATG GGTTCGTGCT AAGCAAGCTT GTGAAATCGC TGAGATTTCA
TATAAGAAAT TCAGACAGTT AATTCAAGTT AACCCTGAAA TTCTGATGAA GCTGTCTGCG
CAAATGGCCT ATCGCCTTCA AAGCACCAGC CAGAAAGTGG GTAACCTCGC ATTCTTAGAC
GTGGCTGGCC GCATTGCCCA AACGCTGTTA CATCTGGCGA AACAGCCTGA TGCTATGACG
CATCCTGATG GCATGCAGAT TAAGATCACT CGTCAAGAGA TAGGCCAAAT AGTTGGCTGT
TCACGGGAAA CTGTGGGTCG TATCTTGAAG ATGTTAGAAG AACAGAATTT GATCCAAGCT
CATGGTAAGA CCATCGTGGT ATACGGTACC CGTTAA
|
|---|
| Protein sequence | MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFRQLIQV NPEILMKLSA
QMAYRLQSTS QKVGNLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQNLIQA HGKTIVVYGT R
|
|---|
| |