Gene Sbal195_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3873 
Symbol 
ID5755688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4565967 
End bp4566602 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content43% 
IMG OID641290215 
ProductcAMP-regulatory protein 
Protein accessionYP_001556293 
Protein GI160876977 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000159716 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGA TTGGTAAGCC AAAACCTGAT CCAACTTTGG AATGGTTTTT ATCACACTGT 
CACATTCATA AGTACCCTGC AAAAAGCACT CTTATTCATG CTGGTGAAGA TTCAGATACT
CTTTATTACA TAGTAAAAGG TTCTGTAGCG GTATTGATTA AAGATGAAGA AGGTAAGGAG
ATGATCCTTT CTTATCTGAA TCAAGGTGAC TTTATCGGTG AACTAGGTTT GTTTGAAGAA
CAAGCCGAAC GTACTGCATG GGTTCGTGCT AAGCAAGCTT GTGAAATCGC TGAGATTTCA
TATAAGAAAT TCAGACAGTT AATTCAAGTT AACCCTGAAA TTCTGATGAA GCTGTCTGCG
CAAATGGCCT ATCGCCTTCA AAGCACCAGC CAGAAAGTGG GTAACCTCGC ATTCTTAGAC
GTGGCTGGCC GCATTGCCCA AACGCTGTTA CATCTGGCGA AACAGCCTGA TGCTATGACG
CATCCTGATG GCATGCAGAT TAAGATCACT CGTCAAGAGA TAGGCCAAAT AGTTGGCTGT
TCACGGGAAA CTGTGGGTCG TATCTTGAAG ATGTTAGAAG AACAGAATTT GATCCAAGCT
CATGGTAAGA CCATCGTGGT ATACGGTACC CGTTAA
 
Protein sequence
MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE 
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFRQLIQV NPEILMKLSA
QMAYRLQSTS QKVGNLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQNLIQA HGKTIVVYGT R