| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_3871 |
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| Symbol | |
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| ID | 5755686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 4564085 |
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| End bp | 4564630 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641290213 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001556291 |
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| Protein GI | 160876975 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0606151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAACAAA GGCTATTTCT CGGCTTCGCG CCTACCGCTG CACAAATGAC AAGGCTGAGT
GATTTACAAC AGCGACTGTT CTGCCACCTT AATCCTGAGG CGAAAGCGGT TAGCGTCATT
AATATGCATT TAACGCTCTG CTTTTTAGGG CAAGTGGACG ACGGGCAACG CATCGCCCTC
CTTGATGCAA TTGACCGCTT AGCTAAGCCT AGATTCAACA CTCAGCTTAA CCAGCTCGAC
TTATGGCCCA ATGCCCAAGT CTGTTGCTTG AAAGGCGATG AAGTTGAGCC GCCGTTAGCG
CAATTAGCTA AGCAGACGCA AGCAATCGCA GGCCGCCTGC AATTGCATAG CAGTGAACAC
CACTTTTGCC CGCACATCAG TTTATTTAGG AAGGCTAAAG AATGGACGCT AAATGAGTCG
GCTTTATTGC AACTCAAGGA CATGAATACG CTAACGTTAA CGCCCGAACG TTTGCATTTA
TATCATTCAA AAAGCACAAG CACGGGTGTG GAATATCACA TCCTACATTC TTGGACGCTC
GGTTAG
|
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| Protein sequence | MQQRLFLGFA PTAAQMTRLS DLQQRLFCHL NPEAKAVSVI NMHLTLCFLG QVDDGQRIAL
LDAIDRLAKP RFNTQLNQLD LWPNAQVCCL KGDEVEPPLA QLAKQTQAIA GRLQLHSSEH
HFCPHISLFR KAKEWTLNES ALLQLKDMNT LTLTPERLHL YHSKSTSTGV EYHILHSWTL
G
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