Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_3868 |
Symbol | |
ID | 5755683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 4556620 |
End bp | 4558944 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641290210 |
Product | penicillin-binding protein 1B |
Protein accession | YP_001556288 |
Protein GI | 160876972 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATG AAGTAGATAT GACGACTAAG ACGACAAAAA AAACACCCGC TTCCCGTAGG GCCAACAATG GCCGCGGTTT ATTTCGACGA ATGTGGTCAA TCACTTGGAA ATTAGCCTTA GCCGGATTAG CTGTAGTGAC GTTCTACAGC ATTTATCTCG ATCAAATTAT TGCGCAAAAA TTTGAAGGCC AAAAATGGCA CTTGCCCGCG CAGGTGTTCA GCCGTTCTAT GGCGCTGTAT CCCGGCGCGG CGGTCAGTCA TCCGCAAATG ATGGCTGAGC TTAAGTTGCT CGGCTATCGC AAAGTCGCGA ATCCACGCCA AGTGGGAGAA TTTTCGGCAT CGAGCACTCG TATCGAATTG TGGCGTCGAC CATTTTTACA TCCTGAAGGC GATCAAGTCG AACAAAGAGT CATGATCAGC TTCGACAGCA ATGGCGTCAG TTCAGTCTCC CGAGTGTCGG ATAAGCGCCA ACTTGCCGTA TTCCATCTTG AGCCTGTGTT GCTCGATCGC ATTATTACTG GCGACGGTGA AGACAGGCTG TTTGTGCCGA CTGAAGAAAT GCCTAAGTCG ATTGTGCAGG CGTTATTGCT GGTGGAAGAC CGCAGCTTTT ACGAACATCA TGGGGTGAAT CCCTTCGCGA TTGCGCGCGC CGCGTTTGTA AACATTAGCG CCGGTCGCAC AGTGCAAGGT GGCTCGACGT TAACCCAGCA GTTAGCGAAA AACTTTTTCC TATCGAGTGA GCGTTCTTTA CTGCGTAAGG TGCGCGAAGC CTTGATGGCA GTGATTATCG ATTTTCGTTA CAGCAAGGAC GAAATCCTCG AAGCCTATCT TAACGAAGTG TATATGGGGC AGGATAAATC CCGCGCCGTT CATGGTATGG GTTTGGCATC GCGTTTCTAT TTCGGCCGTC CTATCAGTGA GTTGACTATC GCCCAGCAGG CATTTTTAGT GGCTGCGATT AAGGGACCGT CTTACTACAA TCCATGGCGA TATCCGGATC GCATTCAAGA GCGTCGCGAT CTGGTATTGC GATTACTCAT GGATGCGGGC GATTTAACCA CGGCCGAGTA CAAGGCGGCG GTAGAGTCAC CTCTGGCGAT CCGTAATCTT AATAAGCCAG CACACCAGAA ATTACCTTCT TTCTTCGCCC TGGTAAAACA GGAAGTGAAC GAGCGTTATG GCGATGCGTT ACTGAAGCAA TCTGGGGTAA AAATCTATAC CACGCTCGAT CCTATGGCCC AAGAAGCCGC CGAAATTGCG GTGACACAAA CCCTTAAAAG CTTAGATAAG AGCAACAAGT CATTGCAGGT AGGCATGGTG GTTACCGACA AATACACGGG CGGTATCGCG GCAATGGTCG GCGATAAAAC CCCTGGATTT GATGGTTTTA ACCGCGCGGT TGAAATTCGT CGTCCAATTG GCTCGTTAAT TAAGCCCTTT GTGTACGCCA CGGCACTGGC ACCCAATAGC CAATTTACCT TAGCGACTCC CCTTAAAGAT CAGCCCATTA CCTTAAAGAG TGAGCAAGGT AAGACATGGT CACCGCAAAA CTTCGATAAG AAGTTCAGCG GCCAAGTGCC TTTGTTAACG GCGCTGAAAA AGTCGATGAA CGTCCCGACA GTGAATCTTG GGATTGCGGT GGGCGTGGAT GCCGTCGCGA CGACTTTGGC TAAGTCGGGC TGGCAGGAGC CGTTAAACGA GTATCCTTCT ATGTTACTTG GCGCCGTCAA TGGCTCGCCA TTAATGGTGG CGCAGGTGTA CCAAACCTTA GCCGATAGCG GGGTTTACCG TAAATTAACC ACAGTGACGG CTGTGTTGGA TGCTGATAAA AATCCATTAC CAGTGACGCG ATTGCCTAAA GAGCAGGCCA TCTCACCCGA TACTGACTTT TTGATCCAGT ACGCGATGCA GCAAGTGGTC AATACGGGCA CAGCGACGCG CTTAGGCAAT GCCTTCCCAG GCGTTGGGCT GGCGGGTAAA ACAGGTACAA GTAACGACAG CCGCGACTCT TGGTTTGCGG GCTTTGATGA GCGTAACGTT GCCGCTATTT GGGTGGGGCG TGATGATAAC GGCAAAACCA GCTTGTATGG CAGCAGTGGC GCCATGGCCG TGTATCTTGC CTTCTTGAAG GAACGTCCAC CCATTAGTTT GCGTTCTATC CAAGTGAATG GCGTCGTGAA GGGCTTTTTT GACCGAGATA CCGGCGTGGC GAAGGAATCG GATTGCAGCA ATGTTGATGC GCTTCCTGCA TTAACCGCGA CTTATCGTCC GGTGAATAAT TGCGGCGAGC CTTTGCAATG GTGGCAGAAA ATACTCGGCC AATAG
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Protein sequence | MNDEVDMTTK TTKKTPASRR ANNGRGLFRR MWSITWKLAL AGLAVVTFYS IYLDQIIAQK FEGQKWHLPA QVFSRSMALY PGAAVSHPQM MAELKLLGYR KVANPRQVGE FSASSTRIEL WRRPFLHPEG DQVEQRVMIS FDSNGVSSVS RVSDKRQLAV FHLEPVLLDR IITGDGEDRL FVPTEEMPKS IVQALLLVED RSFYEHHGVN PFAIARAAFV NISAGRTVQG GSTLTQQLAK NFFLSSERSL LRKVREALMA VIIDFRYSKD EILEAYLNEV YMGQDKSRAV HGMGLASRFY FGRPISELTI AQQAFLVAAI KGPSYYNPWR YPDRIQERRD LVLRLLMDAG DLTTAEYKAA VESPLAIRNL NKPAHQKLPS FFALVKQEVN ERYGDALLKQ SGVKIYTTLD PMAQEAAEIA VTQTLKSLDK SNKSLQVGMV VTDKYTGGIA AMVGDKTPGF DGFNRAVEIR RPIGSLIKPF VYATALAPNS QFTLATPLKD QPITLKSEQG KTWSPQNFDK KFSGQVPLLT ALKKSMNVPT VNLGIAVGVD AVATTLAKSG WQEPLNEYPS MLLGAVNGSP LMVAQVYQTL ADSGVYRKLT TVTAVLDADK NPLPVTRLPK EQAISPDTDF LIQYAMQQVV NTGTATRLGN AFPGVGLAGK TGTSNDSRDS WFAGFDERNV AAIWVGRDDN GKTSLYGSSG AMAVYLAFLK ERPPISLRSI QVNGVVKGFF DRDTGVAKES DCSNVDALPA LTATYRPVNN CGEPLQWWQK ILGQ
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