Gene Sbal195_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal195_3862 
Symbol 
ID5755677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS195 
KingdomBacteria 
Replicon accessionNC_009997 
Strand
Start bp4549576 
End bp4552683 
Gene Length3108 bp 
Protein Length1035 aa 
Translation table11 
GC content52% 
IMG OID641290204 
Productmolydopterin dinucleotide-binding region 
Protein accessionYP_001556282 
Protein GI160876966 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA GTAAACGTCG TTTTATCAAA GGGGCCGCTG TCACAGGTGG TGTGGGATTA 
TTTGCCGCGG GTTATAGCCA TACGTTAGCG CAAATGGGCA AAGGTGTCGT CAATGGCACC
TCGGGGAAAT CGACCCAAGA TCCGCTGCAT GGCAATTCCT TAACACCTGA ATACAAAGTC
GATTTACAGT CAGGTCAGCT GATCAGCAAT GACGATCAGC GCGTCGCCAA TACTATGTGC
TTAGGTTGCT GGACCAAATG CGGCGTACGC GCTCGTATCG ATCAAAAAAC CGATAAGATC
ATCCGCATCA GCGGTAATCC TTATCATCCG TTGTCATCGC GGGAACATAT CGATTTCGAT
ACGCCAATCA AAACCGCATT TGTCGGACTA AGCGCCTTTC AAGAACAAGG TCTACAGGGG
CGTTCCACCG CCTGCGCTCG TGGTAATGCC ATGTTAGAAC AATTGGATAG CCCGCATCGT
GTTACCCAAT GTCTTAAGCG CGTAGGTAAG CGCGGCAGTG GCCAATGGCA GAGCATTAGC
TTTGAGCAGT TGCTGAATGA AGTCGTCGAA GGCGGTGATT TATTTGGCGA AGGCCAAGTT
GAAGGCTTAA GAGCGATTCG AGATATCGCC ACGCCGCTCG ATGCCAATAA TCCGGAATAC
GGCCCTAAGG CCAACCAGTT ACTGGTCTCG AACGCCTCTG ATGAAGGCCG CGATGCCATT
ATCAAACGTT TTACCTTCAA CAGCTTTGGC ACGCGAAACT TTGCCAACCA CGGTGCTTAT
TGCGGGTTTA CCTACCGCGC TGGTGCAGGC GCTTTATTGG ATGATTTGAA AAAATACGCT
CACTTAAAAC CCGATTGGGA CCATAGCGAA TTTTTACTCT TTATCGGCAC CTCGCCGCAG
CAATCGGGCA ATCCCTTTAA ACGCCAAGCG AGACAACTGG CTAACGCGCG AGTCAATAAC
AGCAATTTCA GTTATGTGGT GGTGTCGCCC ATGCTGCCCA ATACCTCGAA TCAACCTTGT
GCGGGCAACA ACACTTGGCT GCCGATCCGC CCCGCCACCG ACTCGGCCCT CGCCATGGGC
ATGTTGCGCT GGATTATCGA TAACCAGCGC TATGCCGCCG ATTTTTTGAG TGCGCCGAAT
GTCGATGCTG CAAAAGCATC AGGTTACCGT GGCTTTAGTA ATGCAGGCTT CTTGATAATC
AGCGAGCCCA CCCATCCAAG ATATGGCCAA TATCTCTTTG CCAGCGATCT TGGCTTACCT
TTCGACGGCA AAGCCTATGG CGAGCAGGAC TCGCAGTTGG TTGTCGATGC AACGAGTGGC
GAGGTAGTTT TTGCTAGCCA AAGTCAAAAA GCCAAGCTCG ACGTTAATCA AAGCGTCGAC
ACACCTAAGG GAGTGATTGC GGTTAAATCT AGCTTCAAAC TGTTAAGTGA AGCGGCGCAC
AGCTTCGAAA TGGCACACTA TGCCAAGGAG TGCGATATCA GCGAGGCGCA GATTATTGCC
CTCGCGGATA AATTTACCAG CCATGGCACT AAGGCCGCAG TGATCTCCCA CGGCGGCACA
ATGAGCGCCA ATGGTTTCTA TAGCGCGTGG GCGATCATGA TGCTCAACGC CATGATAGGT
AACATCAATT TAAAGGGCGG TGCATTAGCC TCCGGCGGTT CCTTTCCCGC CTTTGGTAAA
GGCCCAAGGT ATAATCTGCA GGAGTTTGAC GGCATGGTCG AGCCTAAGGG CGTATTCCTA
TCGCGATCTA AATTCCCCTA CGAGAAAACC TCAGAGTATC GCCGTAAAGT CGAAGCGGGC
GAATCGCCTT ATCCCGCCAA GGAGCCTTGG TTCCCGATTT CATCGCCCTT GCTTGGCGAA
CATTTAACCG CGGCGGTGCA CGGTTATCCC TATCGACTCA AAGCATGGAT TAACCACATG
GGCAATCCAA TTTATGGTCA AGCGGGTTTA GGGGAAGCTA TTGGTGAACA ACTGAAAGAT
CCTAAGGTGC TGCCACTGTT TATCAGTATC GACAGCTTCA TCAACGAAAC CTCGGCGCTG
TCGGATTACA TCGTGCCCGA CACCTTAACG TACGAGTCTT GGGGCTGGAC CTCGGCATGG
CAAGGCACGC TAACCAAAGT TGCCACAGGT CGTTGGCCGA TTGTCGAGCC AAGAGTCGCG
AAAATGGCCA GTGGTGATGT GGTGTGCATG GAGTCTTTCT TGAGCCAAGT GGCGATGAAG
TTGCAACTAC CCGGCTTTGG CGAAAATGCC GTTAAGGCCG CCGATGGCAG CTTACACCCG
TTAACGCGCG CAGCGGATTA CTCACTTTAC GGCGCCGCCA ACGTGGCCTA TTTAGGTAAA
GCCGTCGCCG ATATCAACGC CGAGGACATG TATCTTAGCG GTGTAAGCCG CATTCAAAGT
GAGCTCAACG CTAGACTCAA GCCAGATGAA GTCAAAAAAG TCAGTTACTT ATTTGCTCGC
GGCGGCCGTT TTGAAGAAAT GCGCGGTGCA CGCGATGACA TGGGGAATCC GAGTAAAGTC
TGGCCTAAAC CTATGATGCT GTGGAATCCC GACGTCGGCA GTCGCCGCAA CAGCCTAACA
GGGGAATTTA TGAGTGGTTG TCCGCGCTTA TATCAACCCG CCTTGGCCGA TGGCACGCCG
CTCGATAAGG CGTTTGATAA ATCACAGTGG CCATTACTGA TCAGCAGCTA CAAGTCCCAT
ACCATGAGCT CTATGAGTAT TGGCTCGGAT CGTTTACGCC AAGTACACCC TAATAATCCG
GTGCGACTGA ACGAGAAAAC CGCCGCTCGC CTTGGGATCA GCACGGGCGA CACAGTAAAA
ATCAGCACGC CCAACGGCAG CGTGATTGCC TTAGTGGAAT GTGTTGCCGG AGTGCACCCA
GACTGCATCG CTATCGAACA CGGTTATGGC CATAAAGAAC TCGGCGCGCG GGACACTGTG
ATTGACGAGA TTAAAATCGT CGCCAATCCG CTGATCCGAG TCGGGATCAA CATGAACGAC
TTAAATCTGT TCGATCCCAG TCGTCACGGC CGCTATCCGC TGGTAGACTG GGCAAGTGGC
GCCTCGGCAA GACAAGGCCT ACCCGCTAAG ATTGAAAAAC TAAGCTAA
 
Protein sequence
MDKSKRRFIK GAAVTGGVGL FAAGYSHTLA QMGKGVVNGT SGKSTQDPLH GNSLTPEYKV 
DLQSGQLISN DDQRVANTMC LGCWTKCGVR ARIDQKTDKI IRISGNPYHP LSSREHIDFD
TPIKTAFVGL SAFQEQGLQG RSTACARGNA MLEQLDSPHR VTQCLKRVGK RGSGQWQSIS
FEQLLNEVVE GGDLFGEGQV EGLRAIRDIA TPLDANNPEY GPKANQLLVS NASDEGRDAI
IKRFTFNSFG TRNFANHGAY CGFTYRAGAG ALLDDLKKYA HLKPDWDHSE FLLFIGTSPQ
QSGNPFKRQA RQLANARVNN SNFSYVVVSP MLPNTSNQPC AGNNTWLPIR PATDSALAMG
MLRWIIDNQR YAADFLSAPN VDAAKASGYR GFSNAGFLII SEPTHPRYGQ YLFASDLGLP
FDGKAYGEQD SQLVVDATSG EVVFASQSQK AKLDVNQSVD TPKGVIAVKS SFKLLSEAAH
SFEMAHYAKE CDISEAQIIA LADKFTSHGT KAAVISHGGT MSANGFYSAW AIMMLNAMIG
NINLKGGALA SGGSFPAFGK GPRYNLQEFD GMVEPKGVFL SRSKFPYEKT SEYRRKVEAG
ESPYPAKEPW FPISSPLLGE HLTAAVHGYP YRLKAWINHM GNPIYGQAGL GEAIGEQLKD
PKVLPLFISI DSFINETSAL SDYIVPDTLT YESWGWTSAW QGTLTKVATG RWPIVEPRVA
KMASGDVVCM ESFLSQVAMK LQLPGFGENA VKAADGSLHP LTRAADYSLY GAANVAYLGK
AVADINAEDM YLSGVSRIQS ELNARLKPDE VKKVSYLFAR GGRFEEMRGA RDDMGNPSKV
WPKPMMLWNP DVGSRRNSLT GEFMSGCPRL YQPALADGTP LDKAFDKSQW PLLISSYKSH
TMSSMSIGSD RLRQVHPNNP VRLNEKTAAR LGISTGDTVK ISTPNGSVIA LVECVAGVHP
DCIAIEHGYG HKELGARDTV IDEIKIVANP LIRVGINMND LNLFDPSRHG RYPLVDWASG
ASARQGLPAK IEKLS